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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX67837
CDX70438
CDX70995
CDX71796
CDX78461
CDX78905
CDX84933
CDX88803
CDX89063
CDX89877
CDX91181
CDX92368
CDX92832
CDX97739
CDX98596
CDX99411
CDY01565
CDY03907
CDY09128
CDY15470
CDY15722
CDY18175
CDY27605
CDY29840
CDY30157
CDY35676
CDY41153
CDY48365
CDY51384
CDY67814

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G03630.1 CDX89877 AT1G03630.1 21798944
AT1G03630.1 CDY15470 AT1G03630.1 21798944
AT1G03630.1 CDY18175 AT1G03630.1 21798944
AT1G03630.1 CDY51384 AT1G03630.1 21798944
AT1G03630.1 CDX84933 AT1G27300.1 21798944
AT1G03630.1 CDY03907 AT1G27300.1 21798944
AT1G03630.1 CDY15722 AT1G27300.1 21798944
AT1G03630.1 CDY27605 AT1G27300.1 21798944
AT1G03630.1 CDX97739 AT3G16310.1 21798944
AT1G03630.1 CDY30157 AT3G16310.1 21798944
AT1G03630.1 CDX67837 AT3G60600.1 21798944
AT1G03630.1 CDX71796 AT3G60600.1 21798944
AT1G03630.1 CDX89063 AT3G60600.1 21798944
AT1G03630.1 CDY41153 AT3G60600.1 21798944
AT1G03630.1 CDY48365 AT3G60600.1 21798944
AT1G03630.1 CDX78905 AT4G19030.1 21798944
AT1G03630.1 CDX98596 AT4G19030.1 21798944
AT1G03630.1 CDX99411 AT4G19030.1 21798944
AT1G03630.1 CDY01565 AT4G19030.1 21798944
AT1G03630.1 CDX92832 AT4G27440.1 21798944
AT1G03630.1 CDY29840 AT4G27440.1 21798944
AT1G03630.1 CDX70438 AT5G11980.1 21798944
AT1G03630.1 CDX78461 AT5G11980.1 21798944
AT1G03630.1 CDX91181 AT5G11980.1 21798944
AT1G03630.1 CDY67814 AT5G11980.1 21798944
AT1G03630.1 CDX70995 AT5G22290.1 21798944
AT1G03630.1 CDX88803 AT5G22290.1 21798944
AT1G03630.1 CDX92368 AT5G22290.1 21798944
AT1G03630.1 CDY09128 AT5G22290.1 21798944
AT1G03630.1 CDY35676 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033415.1-P Field mustard plastid 99.75 99.75
CDY18175 Canola plastid 97.5 97.5
AT1G03630.1 Thale cress plastid 94.25 94.02
CDY15470 Canola plastid 92.75 93.22
CDY51384 Canola plastid 92.5 92.96
VIT_12s0059g00270.t01 Wine grape plastid 80.0 80.2
Solyc10g006900.2.1 Tomato plastid 78.5 79.49
PGSC0003DMT400064369 Potato plastid 79.0 79.4
VIT_19s0014g03160.t01 Wine grape plastid 78.25 79.04
Solyc12g013710.1.1 Tomato extracellular, nucleus, plastid 78.25 78.84
PGSC0003DMT400039734 Potato plastid 78.0 78.59
KRH27209 Soybean nucleus, plastid 77.0 77.19
TraesCS2D01G563700.1 Wheat cytosol 46.5 77.18
CDX89249 Canola plastid 76.5 77.08
Zm00001d013937_P001 Maize plastid 76.25 77.02
CDY29311 Canola plastid 76.25 76.83
EER94008 Sorghum plastid 75.5 76.65
KRH55334 Soybean plastid 76.25 76.44
PGSC0003DMT400047264 Potato plastid 76.0 76.38
Solyc07g054210.2.1 Tomato plastid 76.0 76.19
Zm00001d032576_P001 Maize plastid 75.25 76.01
CDY14325 Canola plastid 76.5 75.74
GSMUA_Achr3P14270_001 Banana plastid 73.0 75.45
Os10t0496900-02 Rice plastid 75.25 74.88
HORVU1Hr1G044680.1 Barley plastid 73.75 74.68
CDX98171 Canola plastid 65.0 74.5
TraesCS1B01G186300.1 Wheat plastid 73.5 74.43
CDY18309 Canola plastid 64.75 74.21
GSMUA_Achr11P... Banana plastid 73.25 73.99
KRH26074 Soybean plastid 63.0 73.68
Zm00001d001820_P001 Maize plastid 70.25 72.61
EES11656 Sorghum plastid 69.75 72.47
GSMUA_Achr7P04280_001 Banana plastid 72.0 72.36
TraesCS2A01G590600.1 Wheat plastid 70.0 72.16
TraesCS2D01G563600.1 Wheat golgi, plastid 69.75 71.91
TraesCS2B01G593000.1 Wheat plastid 69.75 71.91
Os04t0678700-01 Rice plastid 69.5 71.83
TraesCS1D01G168700.2 Wheat plastid 73.5 70.5
TraesCS1A01G171000.1 Wheat golgi, plastid 73.5 70.5
HORVU4Hr1G073090.1 Barley plastid 19.0 54.29
HORVU2Hr1G119050.2 Barley mitochondrion 50.5 53.87
HORVU2Hr1G006120.3 Barley plastid 16.25 53.28
HORVU5Hr1G104070.1 Barley plastid 16.5 51.56
HORVU2Hr1G020490.1 Barley plastid 20.5 50.62
CDX92832 Canola plastid 76.75 48.19
CDY29840 Canola plastid 76.0 48.03
CDX86777 Canola cytosol 25.75 32.49
CDY13264 Canola cytosol 25.75 32.49
CDX74954 Canola cytosol 25.75 32.19
CDY18436 Canola cytosol 25.75 32.09
CDY52817 Canola cytosol 25.5 31.88
CDY52816 Canola cytosol 25.5 31.88
CDY10440 Canola plastid 25.75 31.69
CDY69917 Canola endoplasmic reticulum 24.0 31.48
CDX81232 Canola cytosol 25.25 31.46
CDX76338 Canola cytosol, plastid 25.25 31.37
CDY10884 Canola plastid 25.0 31.06
CDY40365 Canola mitochondrion 25.5 30.82
CDX88292 Canola cytosol 11.75 29.94
CDY11217 Canola mitochondrion 24.75 29.91
CDY55418 Canola cytosol 22.25 29.77
CDY68648 Canola cytosol 15.0 28.71
CDX76323 Canola cytosol 23.75 28.61
CDY10985 Canola cytosol 23.75 28.61
CDY53896 Canola plastid 14.25 28.5
CDY10441 Canola cytosol, extracellular, mitochondrion, plastid 9.75 28.47
CDY72089 Canola cytosol 14.25 28.36
CDY72311 Canola cytosol 14.25 28.22
CDY53433 Canola plastid 24.5 28.16
CDY50440 Canola mitochondrion 23.5 27.73
CDY44096 Canola mitochondrion, plastid 24.75 27.42
CDX92838 Canola cytosol 21.25 26.56
CDY70072 Canola cytosol 10.25 24.55
CDY19025 Canola cytosol 22.5 24.13
CDX89228 Canola cytosol, nucleus, peroxisome 22.5 24.13
CDY29859 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 20.25 22.13
CDX71585 Canola mitochondrion 18.25 21.53
HORVU2Hr1G119090.2 Barley plastid 22.0 20.8
CDY64354 Canola cytosol 11.75 20.7
CDY27027 Canola golgi, mitochondrion, nucleus 21.25 18.97
CDX96191 Canola mitochondrion 20.75 18.86
CDY37755 Canola mitochondrion, plastid 22.5 14.45
CDY47833 Canola cytosol, nucleus, plastid 24.75 11.11
CDY08387 Canola cytosol, nucleus, plastid 24.25 10.89
CDY38726 Canola cytosol, golgi, plastid 21.75 10.46
Protein Annotations
KEGG:00860+1.3.1.33Gene3D:3.40.50.720MapMan:7.12.6.5.1GO:A0A078DLV2EnsemblPlants:CDX89877ProteinID:CDX89877
ProteinID:CDX89877.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016630
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00150352001InterPro:NAD(P)-bd_dom_sfPFAM:PF00106PRINTS:PR00081PANTHER:PTHR44419
PANTHER:PTHR44419:SF3InterPro:Prochl_reductInterPro:SDR_famSUPFAM:SSF51735TIGRFAMs:TIGR01289UniPathway:UPA00668
UniParc:UPI0004EDB3D7SEG:seg::::
Description
BnaA10g02050D
Coordinates
chrLK031861:-:572430..574497
Molecular Weight (calculated)
43746.2 Da
IEP (calculated)
9.770
GRAVY (calculated)
-0.350
Length
400 amino acids
Sequence
(BLAST)
001: MALQAAYSLL PSTVSIRKEG KFSASLKETT PTGFSFSNHL KADKISTLLT VKEQRRQSPR FSSVTRAQTV ATPRANEASP EQKKTQRKGT AVITGASSGL
101: GLATAKALAE TGEWHVVMAC RNFLKAEKAA KSVGMSKEDY TVMHLDLASL ESVKQFVESF RRAERPLDVL VCNAAVYRPT AKEPSFTAEG FEISVGTNHL
201: GHFLLSRLLL DDLKKSDYPS KRMIIVGSIT GNTNTLAGNV PPKANLGDLR GLASGLNGQN SSMIDGGEYD GAKAYKDSKV CNMLTMQELH RRYHEETGVT
301: FASLYPGCIA TTGLFREHIP LFRLLFPPFQ KYITKGYVSE EEAGKRLAQV VSDPSLGKSG VYWSWNNNSS SFENQLSKEA SDAEKAKKLW EVSEKLVGLA
Best Arabidopsis Sequence Match ( AT1G03630.1 )
(BLAST)
001: MALQAAYSLL PSTISIQKEG KFNASLKETT FTGSSFSNHL RAEKISTLLT IKEQRRQKPR FSTGIRAQTV TATPPANEAS PEQKKTERKG TAVITGASSG
101: LGLATAKALA DTGKWHVIMA CRNFLKAEKA ARSVGMSKED YTVMHLDLAS LESVKQFVEN FRRTEQPLDV LVCNAAVYQP TAKEPSFTAE GFEISVGTNH
201: LGHFLLSRLL LDDLKKSDYP SKRMIIVGSI TGNTNTLAGN VPPKANLGDL RGLASGLNGQ NSSMIDGGEF DGAKAYKDSK VCNMLTMQEL HRRYHEETGV
301: TFASLYPGCI ATTGLFREHI PLFRLLFPPF QKYITKGYVS EEEAGKRLAQ VVSDPSLGKS GVYWSWNNNS SSFENQLSKE ASDAEKAKKL WEVSEKLVGL
401: A
Arabidopsis Description
PORCProtochlorophyllide reductase C, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48741]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.