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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • cytosol 1
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_19s0014g03160.t01 Wine grape plastid 22.93 24.49
CDX89249 Canola plastid 22.7 24.18
CDY29311 Canola plastid 22.7 24.18
CDX98171 Canola plastid 19.86 24.07
HORVU1Hr1G044680.1 Barley plastid 22.46 24.05
Solyc12g013710.1.1 Tomato extracellular, nucleus, plastid 22.46 23.93
Bra019049.1-P Field mustard plastid 22.46 23.87
CDY18309 Canola plastid 19.62 23.78
PGSC0003DMT400039734 Potato plastid 22.22 23.68
Solyc10g006900.2.1 Tomato plastid 21.99 23.54
AT5G54190.1 Thale cress plastid 22.46 23.46
AT4G27440.1 Thale cress plastid 22.22 23.44
PGSC0003DMT400064369 Potato plastid 21.99 23.37
VIT_12s0059g00270.t01 Wine grape plastid 21.75 23.06
KRH27209 Soybean nucleus, plastid 21.75 23.06
Bra003004.1-P Field mustard plastid 21.75 22.83
KRH55334 Soybean plastid 21.51 22.81
CDY14325 Canola plastid 21.75 22.77
Bra026349.1-P Field mustard plastid 20.8 22.68
CDY51384 Canola plastid 20.8 22.11
PGSC0003DMT400047264 Potato plastid 20.8 22.11
Solyc07g054210.2.1 Tomato plastid 20.8 22.06
CDX89877 Canola plastid 20.8 22.0
Bra033415.1-P Field mustard plastid 20.8 22.0
AT1G03630.1 Thale cress plastid 20.8 21.95
CDY15470 Canola plastid 20.57 21.86
Bra030540.1-P Field mustard plastid 20.57 21.86
CDY18175 Canola plastid 20.33 21.5
KRH26074 Soybean plastid 14.18 17.54
CDY29840 Canola plastid 22.46 15.01
CDX92832 Canola plastid 22.46 14.91
HORVU3Hr1G013970.6 Barley plastid 6.62 7.89
HORVU4Hr1G018230.1 Barley plastid 6.62 7.22
HORVU7Hr1G011180.12 Barley plastid 5.91 6.96
HORVU5Hr1G075530.8 Barley cytosol, nucleus, plastid 6.38 6.96
HORVU4Hr1G086380.1 Barley mitochondrion, plastid 5.67 6.94
HORVU2Hr1G020490.1 Barley plastid 2.36 6.17
HORVU2Hr1G119050.2 Barley mitochondrion 4.96 5.6
HORVU4Hr1G073090.1 Barley plastid 1.65 5.0
HORVU2Hr1G006120.3 Barley plastid 1.42 4.92
HORVU5Hr1G104070.1 Barley plastid 0.47 1.56
Protein Annotations
EnsemblPlants:HORVU2Hr1G119090.2EnsemblPlantsGene:HORVU2Hr1G119090GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016630GO:GO:0055114InterPro:Prochl_reductKEGG:00860+1.3.1.33ncoils:CoilPANTHER:PTHR44419
PANTHER:PTHR44419:SF2SEG:segUniParc:UPI000B46EA39UniProt:A0A287JMV6MapMan:50.1.3:
Description
No Description!
Coordinates
chrchr2H:+:744272984..744274764
Molecular Weight (calculated)
13728.1 Da
IEP (calculated)
8.488
GRAVY (calculated)
-0.083
Length
423 amino acids
Sequence
(BLAST)
001: TNPLVKYSST VHSSSSSLNS CSAVLASDSP SSPSSMALXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXGLFRE HIPLFRTLFP PFQKFVTKGF VSEAESGKRL AQVVAEPSLT KSGVYWSWNK DSASFENQLS
401: QEASDPEKAR KVWELSEKLV GLA
Best Arabidopsis Sequence Match ( AT4G27440.1 )
(BLAST)
001: MALQAASLVS SAFSVRKDAK LNASSSSFKD SSLFGASITD QIKSEHGSSS LRFKREQSLR NLAIRAQTAA TSSPTVTKSV DGKKTLRKGN VVVTGASSGL
101: GLATAKALAE TGKWNVIMAC RDFLKAERAA KSVGMPKDSY TVMHLDLASL DSVRQFVDNF RRTETPLDVL VCNAAVYFPT AKEPTYSAEG FELSVATNHL
201: GHFLLARLLL DDLKKSDYPS KRLIIVGSIT GNTNTLAGNV PPKANLGDLR GLAGGLNGLN SSAMIDGGDF DGAKAYKDSK VCNMLTMQEF HRRFHEETGV
301: TFASLYPGCI ASTGLFREHI PLFRALFPPF QKYITKGYVS ETESGKRLAQ VVSDPSLTKS GVYWSWNNAS ASFENQLSEE ASDVEKARKV WEISEKLVGL
401: A
Arabidopsis Description
PORBProtochlorophyllide reductase B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21218]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.