Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52816 | Canola | cytosol | 98.75 | 98.75 |
| CDX74954 | Canola | cytosol | 98.44 | 98.44 |
| Bra005188.1-P | Field mustard | cytosol | 97.5 | 98.42 |
| CDX81232 | Canola | cytosol | 90.62 | 90.34 |
| CDY18436 | Canola | cytosol | 90.0 | 89.72 |
| CDX88292 | Canola | cytosol | 42.81 | 87.26 |
| AT2G37540.1 | Thale cress | cytosol | 80.94 | 80.69 |
| CDY68648 | Canola | cytosol | 46.56 | 71.29 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 69.38 | 69.16 |
| GSMUA_Achr8P20890_001 | Banana | cytosol, mitochondrion, plastid | 68.44 | 68.44 |
| CDY10440 | Canola | plastid | 69.38 | 68.31 |
| CDY40365 | Canola | mitochondrion | 70.62 | 68.28 |
| VIT_08s0040g03400.t01 | Wine grape | plastid | 67.81 | 66.98 |
| CDY11217 | Canola | mitochondrion | 69.06 | 66.77 |
| GSMUA_Achr7P15240_001 | Banana | plastid | 67.5 | 66.67 |
| KRH19708 | Soybean | nucleus | 67.19 | 66.56 |
| KRH32305 | Soybean | plastid | 67.19 | 66.56 |
| GSMUA_Achr11P... | Banana | cytosol | 66.88 | 66.05 |
| Solyc10g086390.1.1 | Tomato | mitochondrion | 65.94 | 65.33 |
| Zm00001d039848_P002 | Maize | cytosol, mitochondrion, plastid | 65.31 | 65.31 |
| PGSC0003DMT400022813 | Potato | mitochondrion | 65.0 | 65.0 |
| EES02479 | Sorghum | cytosol, plastid | 65.0 | 65.0 |
| Os01t0151700-01 | Rice | cytosol | 65.0 | 64.8 |
| KRH67540 | Soybean | nucleus | 65.31 | 64.71 |
| PGSC0003DMT400049292 | Potato | mitochondrion | 65.31 | 64.71 |
| CDY55418 | Canola | cytosol | 60.31 | 64.55 |
| KRG95813 | Soybean | nucleus | 65.0 | 64.4 |
| Solyc09g010510.2.1 | Tomato | cytosol, mitochondrion, plastid | 64.38 | 64.38 |
| TraesCS3B01G091800.3 | Wheat | cytosol | 63.44 | 63.44 |
| TraesCS5B01G279400.1 | Wheat | plastid | 62.81 | 62.42 |
| TraesCS5D01G287000.1 | Wheat | plastid | 62.81 | 62.42 |
| TraesCS5A01G280400.1 | Wheat | plastid | 62.19 | 61.8 |
| TraesCS3A01G077400.2 | Wheat | cytosol, plastid | 61.88 | 56.57 |
| CDX76338 | Canola | cytosol, plastid | 56.88 | 56.52 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 24.06 | 56.2 |
| HORVU3Hr1G013970.6 | Barley | plastid | 62.19 | 56.06 |
| CDY10884 | Canola | plastid | 55.62 | 55.28 |
| CDX86777 | Canola | cytosol | 54.69 | 55.2 |
| CDY13264 | Canola | cytosol | 54.69 | 55.2 |
| CDY69917 | Canola | endoplasmic reticulum | 51.56 | 54.1 |
| Zm00001d039397_P001 | Maize | cytosol | 39.69 | 52.26 |
| HORVU5Hr1G075530.8 | Barley | cytosol, nucleus, plastid | 62.5 | 51.55 |
| TraesCS3D01G077500.2 | Wheat | cytosol, plastid | 55.31 | 50.57 |
| CDY72089 | Canola | cytosol | 31.56 | 50.25 |
| CDY72311 | Canola | cytosol | 31.56 | 50.0 |
| CDY44096 | Canola | mitochondrion, plastid | 55.94 | 49.58 |
| CDY10985 | Canola | cytosol | 50.0 | 48.19 |
| CDX76323 | Canola | cytosol | 49.69 | 47.89 |
| CDY53896 | Canola | plastid | 29.38 | 47.0 |
| CDY50440 | Canola | mitochondrion | 49.69 | 46.9 |
| CDY53433 | Canola | plastid | 47.19 | 43.39 |
| CDX71585 | Canola | mitochondrion | 39.38 | 37.17 |
| CDY70072 | Canola | cytosol | 15.31 | 29.34 |
| CDX92838 | Canola | cytosol | 28.44 | 28.44 |
| CDX89228 | Canola | cytosol, nucleus, peroxisome | 31.25 | 26.81 |
| CDY19025 | Canola | cytosol | 31.25 | 26.81 |
| CDX89249 | Canola | plastid | 32.5 | 26.2 |
| CDY29311 | Canola | plastid | 32.5 | 26.2 |
| CDX89877 | Canola | plastid | 31.88 | 25.5 |
| CDY18175 | Canola | plastid | 31.88 | 25.5 |
| CDY15470 | Canola | plastid | 31.25 | 25.13 |
| CDY51384 | Canola | plastid | 31.25 | 25.13 |
| CDY14325 | Canola | plastid | 31.25 | 24.75 |
| CDY18309 | Canola | plastid | 26.88 | 24.64 |
| CDY29859 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 28.12 | 24.59 |
| CDY37755 | Canola | mitochondrion, plastid | 47.81 | 24.56 |
| CDX98171 | Canola | plastid | 26.56 | 24.36 |
| CDY64354 | Canola | cytosol | 15.62 | 22.03 |
| CDX96191 | Canola | mitochondrion | 30.0 | 21.82 |
| CDY27027 | Canola | golgi, mitochondrion, nucleus | 29.69 | 21.21 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 47.81 | 17.17 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 47.19 | 16.95 |
| CDY29840 | Canola | plastid | 32.19 | 16.27 |
| CDX92832 | Canola | plastid | 31.88 | 16.01 |
| CDY38726 | Canola | cytosol, golgi, plastid | 30.0 | 11.54 |
Protein Annotations
| EnsemblPlants:CDY52817 | EnsemblPlantsGene:GSBRNA2T00007891001 | Gene3D:3.40.50.720 | GO:A0A078IS66 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR24320 | PANTHER:PTHR24320:SF81 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY52817 |
| ProteinID:CDY52817.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EE6093 | UniProt:A0A078IS66 | MapMan:35.1 |
Description
BnaC04g53640DBnaC04g53640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IS66]
Coordinates
chrLK033133:-:51081..55764
Molecular Weight (calculated)
34925.1 Da
IEP (calculated)
7.359
GRAVY (calculated)
0.006
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIYGMVTGK AGKSGYGSAS TAEDVTHSID AKHLTAIITG GTSGIGLEAA RVLGMRGAHV IIASRNTKAA NDSKEMILQM YPNARIDCLQ LDLSSIKSVR
101: SFIHQFLALN VPLNILINNA GVMFCPFQLS EDGIESQFAT NHIGHFLLTN LLLDKMKSSA RESGIEGRIV NLSSIAHTYT YTEGIMFDYI NDPDRYSEKK
201: AYGQSKLANL LHSNALSRKL QEEGVNITIN SVHPGLITTN LFRHSGLGMA VLKAMSFFLW KNIPQGAATT CYVALHPDLK DVTGKYFADC NVTTPSNFAI
301: DTTLADKLWD FSIKLVESLP
101: SFIHQFLALN VPLNILINNA GVMFCPFQLS EDGIESQFAT NHIGHFLLTN LLLDKMKSSA RESGIEGRIV NLSSIAHTYT YTEGIMFDYI NDPDRYSEKK
201: AYGQSKLANL LHSNALSRKL QEEGVNITIN SVHPGLITTN LFRHSGLGMA VLKAMSFFLW KNIPQGAATT CYVALHPDLK DVTGKYFADC NVTTPSNFAI
301: DTTLADKLWD FSIKLVESLP
001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.