Factsheet for Zm00001d039848_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02479	Sorghum	cytosol, plastid	97.19	97.19
Os01t0151700-01	Rice	cytosol	85.94	85.67
TraesCS3B01G091800.3	Wheat	cytosol	84.69	84.69
TraesCS5B01G279400.1	Wheat	plastid	84.38	83.85
TraesCS5D01G287000.1	Wheat	plastid	84.06	83.54
TraesCS5A01G280400.1	Wheat	plastid	83.12	82.61
TraesCS3A01G077400.2	Wheat	cytosol, plastid	84.38	77.14
HORVU3Hr1G013970.6	Barley	plastid	84.06	75.77
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	75.62	75.62
Zm00001d039397_P001	Maize	cytosol	56.88	74.9
PGSC0003DMT400049292	Potato	mitochondrion	74.38	73.68
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	73.75	73.52
Solyc10g086390.1.1	Tomato	mitochondrion	73.75	73.06
GSMUA_Achr7P15240_001	Banana	plastid	73.44	72.53
VIT_08s0040g03400.t01	Wine grape	plastid	72.5	71.6
GSMUA_Achr11P...	Banana	cytosol	71.56	70.68
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	69.69	69.69
PGSC0003DMT400022813	Potato	mitochondrion	69.06	69.06
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	83.12	68.56
KRG95813	Soybean	nucleus	68.75	68.11
Bra017180.1-P	Field mustard	cytosol	68.12	67.91
CDY18436	Canola	cytosol	67.81	67.6
KRH67540	Soybean	nucleus	68.12	67.49
CDX81232	Canola	cytosol	67.5	67.29
TraesCS3D01G077500.2	Wheat	cytosol, plastid	73.12	66.86
KRH19708	Soybean	nucleus	67.19	66.56
KRH32305	Soybean	plastid	66.56	65.94
Bra005188.1-P	Field mustard	cytosol	65.31	65.93
CDX74954	Canola	cytosol	65.62	65.62
CDY52816	Canola	cytosol	65.62	65.62
CDX88292	Canola	cytosol	32.19	65.61
CDY68648	Canola	cytosol	42.81	65.55
CDY52817	Canola	cytosol	65.31	65.31
CDY10440	Canola	plastid	66.25	65.23
CDY40365	Canola	mitochondrion	67.19	64.95
Bra009580.1-P	Field mustard	mitochondrion	66.88	64.65
AT2G37540.1	Thale cress	cytosol	64.38	64.17
AT5G02540.1	Thale cress	mitochondrion	66.25	64.05
CDY11217	Canola	mitochondrion	65.94	63.75
Bra005729.1-P	Field mustard	mitochondrion	65.94	63.75
CDY55418	Canola	cytosol	56.56	60.54
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	24.06	56.2
Zm00001d047150_P003	Maize	plastid	55.0	55.87
Zm00001d029840_P003	Maize	plastid	55.94	53.59
Zm00001d025129_P001	Maize	mitochondrion	38.12	51.91
Zm00001d019754_P001	Maize	mitochondrion, plastid	55.31	50.14
Zm00001d053067_P001	Maize	plastid	55.0	47.96
Zm00001d027353_P001	Maize	mitochondrion	49.38	43.77
Zm00001d045495_P001	Maize	mitochondrion	49.06	43.49
Zm00001d001820_P001	Maize	plastid	32.5	26.87
Zm00001d013937_P001	Maize	plastid	29.06	23.48
Zm00001d032576_P001	Maize	plastid	29.06	23.48
Zm00001d054039_P001	Maize	cytosol	29.38	22.6
Zm00001d014994_P001	Maize	cytosol	30.62	20.59

Protein Annotations

EMBL:BT039429	EMBL:BT040677	EMBL:BT055893	EnsemblPlants:Zm00001d039848_P002	EnsemblPlants:Zm00001d039848_T002	EnsemblPlantsGene:Zm00001d039848
EntrezGene:100500950	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR24320	PANTHER:PTHR24320:SF81
PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:ONM30003.1	ProteinID:ONM30004.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI00017B74CF	UniProt:B4FQP1	MapMan:35.1	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr3:-:16535244..16539074

Molecular Weight (calculated)

34685.1 Da

IEP (calculated)

9.666

GRAVY (calculated)

-0.034

Length

320 amino acids

Sequence
(BLAST)

001: MGILALITGK AGASGFGSAS TAEQVTDGAD ASRLTVAITG GASGIGLETS RVFALRGAHV VIAARNTEAA SEARKTIMEK NPTARIDVLK LDLSSLKSVR
101: AFVDQFNSMK LPLNILINNA GVMFCPFQLS KDGVEMQFAT NHLGHFLLTN LLLDTMKATA KSTGIEGRIV NLSSVAHHHT YPKGIDFDNL NDEKIYNDKM
201: AYGQSKLANL LHAKELSRRL KEEGANITVN SVHPGLIMTN LMRHSFVLMK VLQVATYILW KNVPQGAATT CYVGLSPQLK GVTGKYFADC NVEKTSKLAR
301: SEELAKQLWD FSEELIKSAK

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.