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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47833 Canola cytosol, nucleus, plastid 97.42 97.42
CDY53896 Canola plastid 21.21 94.5
CDY53433 Canola plastid 36.25 92.82
AT1G64590.1 Thale cress plastid 33.78 90.12
CDY10985 Canola cytosol 27.27 73.19
CDY72089 Canola cytosol 16.39 72.64
CDX76323 Canola cytosol 26.94 72.29
CDY72311 Canola cytosol 16.39 72.28
Solyc08g082870.2.1 Tomato cytosol 27.27 72.11
KRH41377 Soybean cytosol 27.16 71.81
PGSC0003DMT400031933 Potato cytosol 27.16 71.81
VIT_02s0025g02190.t01 Wine grape cytosol 26.94 71.43
CDY50440 Canola mitochondrion 26.94 70.8
GSMUA_Achr8P11870_001 Banana cytosol 26.37 69.12
GSMUA_Achr11P... Banana cytosol 25.36 65.51
TraesCS4B01G358400.1 Wheat mitochondrion 24.24 64.86
TraesCS5A01G527400.1 Wheat mitochondrion 24.24 64.86
TraesCS4D01G351800.1 Wheat mitochondrion 24.24 64.67
Os03t0115700-01 Rice mitochondrion 23.91 64.16
TraesCS5A01G527300.1 Wheat mitochondrion 24.35 63.82
TraesCS4B01G358200.1 Wheat mitochondrion, plastid 23.79 63.66
TraesCS4B01G358500.1 Wheat mitochondrion 24.24 62.79
HORVU4Hr1G086380.1 Barley mitochondrion, plastid 24.35 62.72
TraesCS4D01G351700.1 Wheat mitochondrion, plastid 24.47 61.93
Os06t0129100-01 Rice mitochondrion 24.35 61.47
Zm00001d045495_P001 Maize mitochondrion 24.47 60.39
OQU93381 Sorghum mitochondrion 24.02 60.28
EER87765 Sorghum mitochondrion 24.35 60.28
Zm00001d027353_P001 Maize mitochondrion 24.24 59.83
TraesCS4B01G358300.1 Wheat plastid 20.76 59.29
TraesCS7A01G061000.1 Wheat mitochondrion, plastid 23.46 58.87
HORVU7Hr1G011180.12 Barley plastid 23.57 58.5
TraesCS7D01G055800.1 Wheat mitochondrion, plastid 23.46 57.73
TraesCS4A01G428800.1 Wheat mitochondrion, plastid 23.12 57.38
CDX88292 Canola cytosol 8.98 50.96
CDY18436 Canola cytosol 17.96 49.84
CDY10441 Canola cytosol, extracellular, mitochondrion, plastid 7.63 49.63
CDX81232 Canola cytosol 17.51 48.6
CDY10440 Canola plastid 17.62 48.31
CDX74954 Canola cytosol 17.28 48.12
CDY52816 Canola cytosol 17.28 48.12
CDY52817 Canola cytosol 17.17 47.81
CDY40365 Canola mitochondrion 17.73 47.73
CDY11217 Canola mitochondrion 17.17 46.22
CDY55418 Canola cytosol 14.93 44.48
CDX76338 Canola cytosol, plastid 16.05 44.41
CDX86777 Canola cytosol 15.6 43.85
CDY13264 Canola cytosol 15.49 43.53
CDY10884 Canola plastid 15.6 43.17
CDY69917 Canola endoplasmic reticulum 14.48 42.3
CDY68648 Canola cytosol 9.88 42.11
CDX71585 Canola mitochondrion 15.15 39.82
CDY44096 Canola mitochondrion, plastid 15.82 39.06
CDY70072 Canola cytosol 5.84 31.14
CDX89228 Canola cytosol, nucleus, peroxisome 12.01 28.69
CDX92838 Canola cytosol 10.21 28.44
CDY19025 Canola cytosol 11.9 28.42
CDY37755 Canola mitochondrion, plastid 18.74 26.81
CDY29859 Canola endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 10.44 25.41
CDY18175 Canola plastid 11.0 24.5
CDX89877 Canola plastid 10.89 24.25
CDX89249 Canola plastid 10.66 23.93
CDY29311 Canola plastid 10.66 23.93
CDY51384 Canola plastid 10.66 23.87
CDY15470 Canola plastid 10.66 23.87
CDY14325 Canola plastid 10.44 23.02
CDY18309 Canola plastid 8.75 22.35
CDX98171 Canola plastid 8.64 22.06
CDY64354 Canola cytosol 5.5 21.59
CDX96191 Canola mitochondrion 10.55 21.36
CDY27027 Canola golgi, mitochondrion, nucleus 10.66 21.21
CDY29840 Canola plastid 11.9 16.75
CDX92832 Canola plastid 11.78 16.48
CDY38726 Canola cytosol, golgi, plastid 13.69 14.66
Protein Annotations
KEGG:00253+2.1.1.-KEGG:00270+2.1.1.-KEGG:00332+2.1.1.-KEGG:00340+2.1.1.-KEGG:00350+2.1.1.-KEGG:00360+2.1.1.-
KEGG:00380+2.1.1.-KEGG:00450+2.1.1.-KEGG:00522+2.1.1.-KEGG:00523+2.1.1.-KEGG:00624+2.1.1.-KEGG:00627+2.1.1.-
KEGG:00860+2.1.1.-KEGG:00940+2.1.1.-KEGG:00941+2.1.1.-KEGG:00942+2.1.1.-KEGG:00945+2.1.1.-KEGG:00950+2.1.1.-
KEGG:00981+2.1.1.-Gene3D:3.40.50.720MapMan:35.1GO:A0A078F5L7UniProt:A0A078F5L7EnsemblPlants:CDY08387
ProteinID:CDY08387ProteinID:CDY08387.1GO:GO:0003674GO:GO:0003824GO:GO:0006412GO:GO:0008150
GO:GO:0008152GO:GO:0008168GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0019538
GO:GO:0032259EnsemblPlantsGene:GSBRNA2T00000128001InterPro:NAD(P)-bd_dom_sfPFAM:PF00106PFAM:PF09243PRINTS:PR00081
PANTHER:PTHR24320PANTHER:PTHR24320:SF114InterPro:Ribosomal_Rsm22-likeInterPro:SAM-dependent_MTasesInterPro:SDR_famSUPFAM:SSF51735
SUPFAM:SSF53335UniParc:UPI0004EDD3BDSEG:seg:::
Description
BnaC09g12090DBnaC09g12090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5L7]
Coordinates
chrLK031985:+:821570..826787
Molecular Weight (calculated)
100719.0 Da
IEP (calculated)
8.406
GRAVY (calculated)
-0.466
Length
891 amino acids
Sequence
(BLAST)
001: MIETVKHLIG SGGPSGFGSR STAEHVTANC DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVIPARSLKT AEETKSRILS EFPDAEIIVM QLDLSSLASV
101: RRFVDDFESL HLPLNILINN AGKYAQKHAI SEDGVEMTFA TNYLGHFLLT KLLLKNMIET AEQTGVQGRI VNVTSVIHSW FSGDMLQYVA DISRNNRNYD
201: ATRAYALSKL ANVLHTIELS RILHKMDANV TANCVHPGIV RTRLTRDRDG LITDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARTS
301: KSGSCNLKAQ RLWTASELLV TAASTPNVYQ TFNYFLTNTM LYQREMANAQ KAFTIESLRT LAKQSFRCLV VPVRLRRAIK KYLREEDDPH IRKKVRQLSE
401: SFQEIKDSNL LLPETTAKRL ADSMNSVEAK RWKIQTVYGD SGLEYRDGET AAYVASRMPA AYSVCYRVLT EIRRRLPGFN PTRVLDFGAG TGSGFWAVQE
501: VWPKCAQKVN IVEPSQSMQR AGRDLLQGLK DLPLIHGYTS LLSLSQELNK KCRILNDKSE RKHELVIASY VLGEIPSLKD RITMVRQLWD LTDDLLVLVE
601: PGTPHGANII SQMRSYILWM ENRKLRKKEK AEAGKEVLDL KSGAHIVAPC PHDGKCPLEN TAKYCHFVQR LQRTSSQRSY KRTKGVPLRG FEDEKFCFVV
701: FRRGQRPREP WPLDNIKLET LKEMRANRKP EDLEIDYEEF IKTQVVEVPY SDPRAQDSDI TDEDEQEEEG EGEGTDEDEV EVEEAEEEEG SGRASVGGGW
801: GRIIFPPFRK GKQVTLDMCV PTNEEGSEGA FERRVITKSK NPHLHLQAKK SFWGDLWPLT TQQQDISKEN KKVDAEWCRP DQDQKWGAWP W
Best Arabidopsis Sequence Match ( AT1G64600.1 )
(BLAST)
001: MANAQKVFTV ETLRSASKQC LRCLVVPVRL RRAIKKYLRE EDDPHIRKKV RQLSESFQEI KDTNLQLPET TAKSLADSMN SLETKRWKIQ TVYGDSGLQY
101: RDGETAAYIA SRMPAVFSVC YRVLIEIRRR VPGFTPTRVL DFGAGTGSGF WAVKEVWPKS VEKVNIVEPS QSMQRAGRNL IQGLKDLPLI HGYTSLLALN
201: KEINKKSERK HDLVIASYVL GEIPSLKDRI TVVRQLWDLT DDLLVLVEPG TPHGANIISQ MRSHILWMEK RKLRKLEKKM KKDGKEVLDL KSGAHIVAPC
301: PHDGKCPLEN TGKYCHFVQR LQRTSSQRSY KRTKGVPLRG FEDEKFCFVA FRRGQRPREL WPLDGMKLET LKERRANKKP EDLEIDYEDF IKSQVVEVPY
401: IDPRAYDSDT MDENEEEQED GGGTDEDEED KIEEEIEEES ERASVGGGWG RIIFPPFRKG KQVTLDMCVP TKEDGSEGAF ERRVITKSKN PDLHLQAKKS
501: FWGDLWPLTT QQENGKKKQV DAEWCRPDED QKWSGWP
Arabidopsis Description
At1g64600 [Source:UniProtKB/TrEMBL;Acc:Q8GW63]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.