Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040848 | Potato | plastid | 95.53 | 95.53 |
| VIT_16s0050g00760.t01 | Wine grape | plastid | 75.4 | 75.4 |
| KRH38419 | Soybean | plastid | 72.2 | 70.85 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.33 | 69.33 |
| Solyc03g025410.2.1 | Tomato | nucleus | 68.69 | 68.69 |
| Solyc08g081200.2.1 | Tomato | cytosol | 66.77 | 66.35 |
| GSMUA_Achr2P18620_001 | Banana | plastid | 66.77 | 66.14 |
| Solyc03g025390.2.1 | Tomato | cytosol | 66.13 | 66.13 |
| EER96376 | Sorghum | mitochondrion, plastid | 66.45 | 65.82 |
| Solyc03g025400.2.1 | Tomato | cytosol | 66.13 | 65.51 |
| TraesCS4B01G002900.1 | Wheat | golgi | 65.5 | 64.87 |
| Os09t0570300-01 | Rice | plasma membrane | 65.18 | 64.56 |
| TraesCS4D01G002700.2 | Wheat | mitochondrion, plastid | 64.86 | 64.44 |
| TraesCS4D01G003200.1 | Wheat | golgi | 64.22 | 63.61 |
| TraesCS4B01G003400.1 | Wheat | plastid | 63.9 | 63.49 |
| Solyc08g008060.1.1 | Tomato | cytosol | 63.9 | 63.49 |
| TraesCS4A01G311400.1 | Wheat | mitochondrion, plastid | 63.9 | 63.29 |
| OQU92195 | Sorghum | cytosol | 63.26 | 62.86 |
| TraesCS4D01G003400.2 | Wheat | mitochondrion | 64.54 | 62.73 |
| Zm00001d047150_P003 | Maize | plastid | 62.62 | 62.22 |
| EER91987 | Sorghum | plastid | 61.66 | 61.66 |
| Os04t0291100-01 | Rice | mitochondrion | 61.34 | 61.15 |
| TraesCS1A01G207500.1 | Wheat | cytosol | 60.7 | 60.32 |
| OQU92191 | Sorghum | plastid | 59.42 | 59.42 |
| TraesCS1B01G221200.1 | Wheat | cytosol | 59.74 | 59.37 |
| TraesCS1D01G210800.1 | Wheat | plastid | 59.42 | 58.49 |
| Zm00001d019754_P001 | Maize | mitochondrion, plastid | 65.5 | 58.07 |
| TraesCS5B01G461100.1 | Wheat | mitochondrion, plastid | 21.09 | 57.39 |
| Zm00001d029840_P003 | Maize | plastid | 61.02 | 57.19 |
| Zm00001d025129_P001 | Maize | mitochondrion | 42.81 | 57.02 |
| Os10t0547900-01 | Rice | cytosol | 56.87 | 56.69 |
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 20.77 | 56.52 |
| TraesCS3B01G220800.1 | Wheat | mitochondrion, plastid | 20.77 | 56.52 |
| Os10t0548000-02 | Rice | cytosol, peroxisome, plastid | 57.51 | 56.43 |
| Solyc09g010510.2.1 | Tomato | cytosol, mitochondrion, plastid | 56.87 | 55.62 |
| Solyc10g086390.1.1 | Tomato | mitochondrion | 55.91 | 54.18 |
| Solyc08g082870.2.1 | Tomato | cytosol | 48.56 | 45.1 |
| Solyc03g112540.2.1 | Tomato | endoplasmic reticulum | 46.65 | 40.56 |
| Solyc06g071610.1.1 | Tomato | plastid | 44.41 | 37.98 |
| Solyc12g042640.1.1 | Tomato | cytosol | 30.99 | 26.72 |
| Solyc10g006900.2.1 | Tomato | plastid | 32.91 | 26.08 |
| Solyc07g054210.2.1 | Tomato | plastid | 33.23 | 26.07 |
| Solyc03g098460.2.1 | Tomato | cytosol | 31.63 | 25.71 |
| Solyc12g013710.1.1 | Tomato | extracellular, nucleus, plastid | 32.27 | 25.44 |
Protein Annotations
| EnsemblPlants:Solyc03g025370.2.1 | EnsemblPlantsGene:Solyc03g025370.2 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF121 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI0002768ACD | UniProt:K4BF10 | MapMan:23.1.3.5.1 | : | : | : |
Description
No Description!
Coordinates
chr3:-:2802177..2807452
Molecular Weight (calculated)
33793.5 Da
IEP (calculated)
9.809
GRAVY (calculated)
-0.108
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MWFLSKKGLS GFSPNSTAEE VTQAIDGSAL TAIVTGASSG IGAETARVLA LRGVHVIMGV RNISAGKQVK ETITKAVPQA KIDALELDLS SLASVRNFAS
101: NYNSLGLPLN LLINNAGIMA TPFALSKDNI ELQFATNHVG HFLLTNLLLD TMKKTARESR KEGRIVNVSS RRHKFSYNEG IRFDKINDQS GYNRLSAYGQ
201: SKLANVLHTN ELARHLKDEG VEITANSLHP GAIATNLFRQ NSIISGIVNV IGKHVMKNVE QGAATTCYVA LHPDVKGVSG KYYADCNIAE ASPQANDAGL
301: AKRMWDFTMS LVH
101: NYNSLGLPLN LLINNAGIMA TPFALSKDNI ELQFATNHVG HFLLTNLLLD TMKKTARESR KEGRIVNVSS RRHKFSYNEG IRFDKINDQS GYNRLSAYGQ
201: SKLANVLHTN ELARHLKDEG VEITANSLHP GAIATNLFRQ NSIISGIVNV IGKHVMKNVE QGAATTCYVA LHPDVKGVSG KYYADCNIAE ASPQANDAGL
301: AKRMWDFTMS LVH
001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLA LRGVHVVMAV RNTGAGAKVK EDIVKQVPGA KVDVMELELS SMESVRKFAS
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.