Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030044.1-P | Field mustard | cytosol | 98.58 | 97.21 |
| CDY03918 | Canola | cytosol | 91.98 | 93.75 |
| CDY27615 | Canola | cytosol | 79.25 | 79.25 |
| CDX84923 | Canola | cytosol | 76.89 | 78.37 |
| CDX90082 | Canola | cytosol | 66.04 | 67.31 |
| CDY11814 | Canola | cytosol | 64.15 | 65.38 |
| AT1G27390.1 | Thale cress | cytosol | 63.68 | 64.29 |
| KRH31475 | Soybean | mitochondrion | 50.94 | 53.73 |
| PGSC0003DMT400052223 | Potato | cytosol | 50.94 | 52.68 |
| Solyc02g094140.2.1 | Tomato | cytosol | 49.53 | 51.47 |
| Solyc02g068130.2.1 | Tomato | plastid | 49.06 | 50.98 |
| KRG97423 | Soybean | cytosol | 51.89 | 50.69 |
| CDY34181 | Canola | cytosol | 41.51 | 44.22 |
| PGSC0003DMT400056935 | Potato | cytosol | 39.62 | 43.75 |
| Zm00001d042329_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 41.51 | 43.35 |
| CDY28496 | Canola | cytosol | 41.04 | 43.07 |
| EES01977 | Sorghum | cytosol | 41.04 | 42.86 |
| PGSC0003DMT400056939 | Potato | cytosol | 33.96 | 42.6 |
| Zm00001d012017_P002 | Maize | mitochondrion | 40.57 | 42.57 |
| GSMUA_Achr8P00730_001 | Banana | plasma membrane, vacuole | 15.09 | 42.11 |
| Os01t0921600-01 | Rice | mitochondrion, plastid | 37.74 | 39.6 |
| TraesCS3A01G429800.1 | Wheat | cytosol | 39.15 | 39.52 |
| TraesCS3D01G425100.1 | Wheat | cytosol | 38.68 | 39.23 |
| TraesCS3B01G467700.1 | Wheat | golgi | 38.21 | 38.76 |
| Zm00001d040209_P001 | Maize | cytosol | 25.47 | 33.13 |
| CDY35747 | Canola | cytosol | 16.98 | 28.12 |
| HORVU3Hr1G094550.2 | Barley | plastid | 22.64 | 21.43 |
| HORVU7Hr1G075380.6 | Barley | cytosol, plastid | 13.68 | 17.68 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:23.2.1.5 | GO:A0A078FMM9 | UniProt:A0A078FMM9 | EnsemblPlants:CDY15710 | ProteinID:CDY15710 |
| ProteinID:CDY15710.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005742 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0045040 | EnsemblPlantsGene:GSBRNA2T00089934001 |
| InterPro:IPR011990 | PFAM:PD102047 | PFAM:PF06552 | PANTHER:PTHR32409 | SUPFAM:SSF48452 | TMHMM:TMhelix |
| InterPro:TOM20_imprt_rcpt | InterPro:TPR-like_helical_dom_sf | UniParc:UPI0004EEDC03 | SEG:seg | : | : |
Description
BnaA07g08810DBnaA07g08810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMM9]
Coordinates
chrLK032056:+:696876..698442
Molecular Weight (calculated)
22897.2 Da
IEP (calculated)
4.778
GRAVY (calculated)
-0.362
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFSAADFDR LMMVDLARNA CEEQYKKDPL DSENLLKWGG ALLELSQFQS VADAKLMLDD ALSKFEEVLT INPGKHQALW CLGNAYSSQA FLNPDSDVAQ
101: GLFDKAADYF ERAENMDPGN EMYLKSMEVA TEGPKLHKEI HKHGGMMQQA LAGGGGGGGG PSASSNAGGG KKNNKMKNND FTYDVCGWII LAFGIVAWVG
201: MAKSLGPPPP AR
101: GLFDKAADYF ERAENMDPGN EMYLKSMEVA TEGPKLHKEI HKHGGMMQQA LAGGGGGGGG PSASSNAGGG KKNNKMKNND FTYDVCGWII LAFGIVAWVG
201: MAKSLGPPPP AR
001: MEFSTADFER LIMFEHARKN SEAQYKNDPL DSENLLKWGG ALLELSQFQP IPEAKLMLND AISKLEEALT INPGKHQALW CIANAYTAHA FYVHDPEEAK
101: EHFDKATEYF QRAENEDPGN DTYRKSLDSS LKAPELHMQF MNQGMGQQIL GGGGGGGGGG MASSNVSQSS KKKKRNTEFT YDVCGWIILA CGIVAWVGMA
201: KSLGPPPPAR
101: EHFDKATEYF QRAENEDPGN DTYRKSLDSS LKAPELHMQF MNQGMGQQIL GGGGGGGGGG MASSNVSQSS KKKKRNTEFT YDVCGWIILA CGIVAWVGMA
201: KSLGPPPPAR
Arabidopsis Description
TOM20-2TOM20-2 [Source:UniProtKB/TrEMBL;Acc:A0A178W7F2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.