Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G094550.2 | Barley | plastid | 52.44 | 38.39 |
| Zm00001d040209_P001 | Maize | cytosol | 27.44 | 27.61 |
| GSMUA_Achr8P00740_001 | Banana | cytosol | 22.56 | 21.64 |
| VIT_14s0068g02030.t01 | Wine grape | cytosol | 24.39 | 19.9 |
| GSMUA_Achr8P09300_001 | Banana | cytosol | 24.39 | 19.9 |
| AT5G40930.1 | Thale cress | cytosol | 21.95 | 19.25 |
| GSMUA_AchrUn_... | Banana | cytosol | 23.17 | 18.91 |
| Solyc02g094140.2.1 | Tomato | cytosol | 22.56 | 18.14 |
| PGSC0003DMT400052223 | Potato | cytosol | 22.56 | 18.05 |
| KRG94268 | Soybean | nucleus | 22.56 | 17.7 |
| Solyc02g068130.2.1 | Tomato | plastid | 21.95 | 17.65 |
| KRH57705 | Soybean | nucleus | 22.56 | 17.62 |
| AT1G27390.1 | Thale cress | cytosol | 20.73 | 16.19 |
| CDX84923 | Canola | cytosol | 20.12 | 15.87 |
| Bra032980.1-P | Field mustard | cytosol | 18.9 | 15.58 |
| CDY34181 | Canola | cytosol | 18.9 | 15.58 |
| Bra032826.1-P | Field mustard | cytosol | 20.12 | 15.57 |
| CDY27615 | Canola | cytosol | 20.12 | 15.57 |
| KRH31475 | Soybean | mitochondrion | 18.9 | 15.42 |
| AT3G27080.1 | Thale cress | cytosol | 18.9 | 15.35 |
| CDY28496 | Canola | cytosol | 18.9 | 15.35 |
| PGSC0003DMT400056939 | Potato | cytosol | 15.24 | 14.79 |
| CDY11814 | Canola | cytosol | 17.68 | 13.94 |
| CDY03918 | Canola | cytosol | 17.68 | 13.94 |
| KRG97423 | Soybean | cytosol | 18.29 | 13.82 |
| CDY15710 | Canola | cytosol | 17.68 | 13.68 |
| Bra030044.1-P | Field mustard | cytosol | 17.68 | 13.49 |
| CDX90082 | Canola | cytosol | 17.07 | 13.46 |
| Bra010946.1-P | Field mustard | cytosol | 16.46 | 12.92 |
| PGSC0003DMT400056935 | Potato | cytosol | 14.63 | 12.5 |
| GSMUA_Achr8P00730_001 | Banana | plasma membrane, vacuole | 4.27 | 9.21 |
| AT3G27070.2 | Thale cress | plasma membrane | 12.2 | 8.06 |
| CDY35747 | Canola | cytosol | 2.44 | 3.12 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:23.2.1.5 | UniProt:A0A287WXU3 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005742 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0045040 |
| EnsemblPlantsGene:HORVU7Hr1G075380 | EnsemblPlants:HORVU7Hr1G075380.6 | InterPro:IPR011990 | PFAM:PD102047 | PFAM:PF06552 | PANTHER:PTHR32409 |
| InterPro:TOM20_imprt_rcpt | InterPro:TPR-like_helical_dom_sf | UniParc:UPI000B4607B0 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr7H:+:436646319..436651534
Molecular Weight (calculated)
18403.4 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.330
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: AIYQPLAQPR PDRPAPATPP PYSRRLAVSP QTPRPRLSRP SPVPALPRLA AAPDLAAVAV AVAMDMAAMN DPERLFFFYL ACKTAKATYD ENPLDADNLM
101: RWGGALLELS QMHNGPESLK CLEDLGKHDP ERRQEMRKIF YTRVMGILLY NHVHHFPPLL NLDL
101: RWGGALLELS QMHNGPESLK CLEDLGKHDP ERRQEMRKIF YTRVMGILLY NHVHHFPPLL NLDL
001: MDMQNENERL MVFEHARKVA EATYVKNPLD AENLTRWAGA LLELSQFQTE PKQMILEAIL KLGEALVIDP KKHDALWLIG NAHLSFGFLS SDQTEASDNF
101: EKASQFFQLA VEEQPESELY RKSLTLASKA PELHTGGTAG PSSNSAKVVS FIRNYNLV
101: EKASQFFQLA VEEQPESELY RKSLTLASKA PELHTGGTAG PSSNSAKVVS FIRNYNLV
Arabidopsis Description
TOM20-4Mitochondrial import receptor subunit TOM20-4 [Source:UniProtKB/Swiss-Prot;Acc:P82805]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.