Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G038330.2 | |
| HORVU2Hr1G046220.7 | |
| HORVU4Hr1G006740.1 | |
| HORVU4Hr1G080140.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G143100.1 | Wheat | cytosol | 89.7 | 90.09 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 78.11 | 79.48 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 76.39 | 77.39 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 42.92 | 41.15 |
| Zm00001d045137_P001 | Maize | plastid | 29.18 | 39.77 |
| OQU75953 | Sorghum | cytosol | 44.21 | 39.02 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 21.46 | 32.47 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 28.76 | 32.37 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 28.33 | 32.2 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 23.18 | 30.68 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 22.75 | 30.11 |
| Bra035174.1-P | Field mustard | cytosol | 20.6 | 27.12 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 21.89 | 26.84 |
| CDX87319 | Canola | cytosol | 20.17 | 26.55 |
| CDY39968 | Canola | cytosol | 20.17 | 26.55 |
| KRH23610 | Soybean | cytosol | 21.03 | 25.52 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 21.03 | 25.52 |
| KRH09696 | Soybean | cytosol | 21.46 | 25.51 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 20.6 | 25.4 |
| Solyc03g117340.1.1 | Tomato | cytosol | 19.31 | 24.86 |
| AT1G80520.1 | Thale cress | nucleus | 20.17 | 24.48 |
| CDX79380 | Canola | cytosol | 20.17 | 24.23 |
| PGSC0003DMT400073435 | Potato | cytosol | 19.74 | 24.08 |
| Bra003571.1-P | Field mustard | cytosol | 19.31 | 24.06 |
| CDX67952 | Canola | cytosol | 19.31 | 24.06 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 11.59 | 23.89 |
| Solyc06g068310.1.1 | Tomato | cytosol | 19.74 | 23.83 |
| PGSC0003DMT400084778 | Potato | nucleus | 18.88 | 23.53 |
| PGSC0003DMT400073434 | Potato | cytosol | 13.3 | 23.13 |
| CDY61373 | Canola | cytosol | 19.74 | 22.77 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 29.18 | 22.44 |
| Solyc03g117310.1.1 | Tomato | cytosol | 20.17 | 22.38 |
| CDY36586 | Canola | nucleus | 19.31 | 22.28 |
| Bra026110.1-P | Field mustard | cytosol | 19.31 | 22.28 |
| PGSC0003DMT400036834 | Potato | nucleus | 19.74 | 21.9 |
| AT1G15760.1 | Thale cress | nucleus | 18.88 | 21.78 |
| KRH47406 | Soybean | cytosol | 18.45 | 21.18 |
| VIT_09s0002g08420.t01 | Wine grape | golgi, plasma membrane | 21.03 | 20.85 |
| VIT_11s0118g00550.t01 | Wine grape | cytosol | 21.46 | 19.92 |
| PGSC0003DMT400078859 | Potato | cytosol | 21.03 | 19.37 |
| Solyc07g007350.1.1 | Tomato | cytosol | 20.6 | 18.82 |
| KRH44503 | Soybean | cytosol | 17.17 | 18.43 |
| AT2G12462.1 | Thale cress | cytosol | 19.31 | 18.07 |
| CDY50403 | Canola | cytosol | 18.03 | 16.94 |
| Bra013153.1-P | Field mustard | cytosol | 18.03 | 16.94 |
| CDX93107 | Canola | cytosol | 18.03 | 16.94 |
| KRH12842 | Soybean | cytosol, nucleus, plastid | 20.17 | 16.55 |
| KRH20227 | Soybean | cytosol | 20.17 | 15.93 |
| KRH37823 | Soybean | nucleus | 19.74 | 15.7 |
| KRH03583 | Soybean | nucleus | 19.74 | 14.47 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G029260.1 | EnsemblPlantsGene:HORVU7Hr1G029260 | Gene3D:1.10.150.50 | InterPro:SAM/pointed_sf | PANTHER:PTHR33915 | SEG:seg |
| SUPFAM:SSF47769 | UniParc:UPI000B485634 | UniProt:A0A287VVK9 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr7H:-:54730908..54734115
Molecular Weight (calculated)
24623.0 Da
IEP (calculated)
7.506
GRAVY (calculated)
-0.290
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWYEWLRRA GLGEDLAAEY ALLFARNELG AADVRHLDHA FLATMGVAVA KHRLEILKLA RKESSASAAI TVLPWRATRL LATAAQRSAR SLAGCLRSAA
101: RRGRSKAAVA PRPLALCHQG VAGPARWKGA PTAADGRGVT ARKLAAFLAR VGKPMHALTN SAGKGATKNG AVASPPTYMA TSIAAACFAS TETCGSDYDA
201: DDDEDDKDAE TDDGGGEDPE TPWESMFQDL NPT
101: RRGRSKAAVA PRPLALCHQG VAGPARWKGA PTAADGRGVT ARKLAAFLAR VGKPMHALTN SAGKGATKNG AVASPPTYMA TSIAAACFAS TETCGSDYDA
201: DDDEDDKDAE TDDGGGEDPE TPWESMFQDL NPT
001: MEDWWFSWLS RTNLEPSLIH EYGLSFSQNE LEHEDISYFD HEFLQSMGIS IAKHRLEILK LARRDRKNSP PLTSRSISRV VTAIKKTRKC LSDHVRAWIR
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT
Arabidopsis Description
At1g15760 [Source:UniProtKB/TrEMBL;Acc:Q9LMQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.