CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47406	Soybean	cytosol	70.97	75.86
KRH09696	Soybean	cytosol	55.76	61.73
KRH23610	Soybean	cytosol	50.23	56.77
PGSC0003DMT400084778	Potato	nucleus	40.55	47.06
GSMUA_Achr9P26950_001	Banana	cytosol	33.18	46.75
Solyc06g068310.1.1	Tomato	cytosol	41.47	46.63
Solyc03g117340.1.1	Tomato	cytosol	38.25	45.86
PGSC0003DMT400073435	Potato	cytosol	40.09	45.55
VIT_09s0002g08420.t01	Wine grape	golgi, plasma membrane	47.47	43.83
GSMUA_Achr8P14710_001	Banana	cytosol	32.72	40.34
GSMUA_Achr4P09380_001	Banana	cytosol	34.1	39.15
GSMUA_Achr8P17040_001	Banana	cytosol	31.34	38.64
GSMUA_Achr1P09970_001	Banana	cytosol	33.64	38.02
GSMUA_Achr8P25150_001	Banana	cytosol	31.34	35.79
HORVU2Hr1G114860.1	Barley	mitochondrion	13.82	26.55
EES11537	Sorghum	cytosol	22.58	26.34
KRH12842	Soybean	cytosol, nucleus, plastid	31.34	23.94
Os04t0644100-01	Rice	cytosol	20.74	23.94
Zm00001d002096_P001	Maize	cytosol	22.58	23.9
KRH20227	Soybean	cytosol	32.26	23.73
KRH37823	Soybean	nucleus	31.34	23.21
HORVU7Hr1G049610.2	Barley	cytosol, extracellular, plastid	21.66	22.93
HORVU7Hr1G115240.1	Barley	cytosol, extracellular, mitochondrion	21.66	22.71
TraesCS7B01G432100.1	Wheat	cytosol	21.2	22.22
TraesCS7D01G506000.1	Wheat	cytosol, extracellular, mitochondrion	22.12	22.12
Zm00001d036740_P001	Maize	cytosol	20.28	21.89
KRH03583	Soybean	nucleus	31.8	21.7
TraesCS2D01G520300.1	Wheat	cytosol	20.74	21.63
TraesCS2B01G547200.1	Wheat	cytosol	19.82	21.61
TraesCS7A01G515500.1	Wheat	cytosol, extracellular, mitochondrion	21.2	21.1
TraesCS2A01G518900.1	Wheat	cytosol	20.28	20.95
Zm00001d046580_P001	Maize	cytosol	20.28	20.85
EER90109	Sorghum	nucleus	21.2	20.72
Os06t0645500-01	Rice	cytosol, nucleus, peroxisome	22.58	20.59
TraesCS7D01G143100.1	Wheat	cytosol	18.89	17.67
TraesCS7B01G044000.1	Wheat	cytosol	18.43	17.47
HORVU7Hr1G029260.1	Barley	cytosol	18.43	17.17
TraesCS7A01G141900.1	Wheat	cytosol	17.51	16.52
Zm00001d037494_P001	Maize	cytosol, extracellular, plastid	18.43	16.46
OQU75953	Sorghum	cytosol	19.82	16.29
OQU80824	Sorghum	plastid	14.75	15.76
Zm00001d045137_P001	Maize	plastid	9.68	12.28
Os06t0179100-00	Rice	cytosol, nucleus	16.13	11.55

Protein Annotations

EMBL:ACUP02004930	EMBL:BT091261	EnsemblPlants:KRH44503	EnsemblPlantsGene:GLYMA_08G214800	EntrezGene:100500342	Gene3D:1.10.150.50
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001660	InterPro:SAM	InterPro:SAM/pointed_sf
PANTHER:PTHR33915	PANTHER:PTHR33915:SF1	PFscan:PS50105	ProteinID:KRH44503	ProteinID:KRH44503.1	SEG:seg
SUPFAM:SSF47769	UniParc:UPI0001B1589A	UniProt:C6T1F5	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr8:+:17392333..17393904

Molecular Weight (calculated)

24900.9 Da

IEP (calculated)

9.724

GRAVY (calculated)

-0.464

Length

217 amino acids

Sequence
(BLAST)

001: MDWFSWLSKT GLEPTLVYEY GLTFAHNELE EEDITYFNHE FLMSMGISIA KHRLEILKLA RKVKGKRAAP PRPVARLMVA IKRTKRCLAN YIRSFISTCE
101: EESSALVVVP SSSSRSYYGT RWKSNHVMKR NKKMVVAKQE RLLLTNGSPN TVVHGLDAFT SPNIVYHFQK DEQMEGDDGY WSSAATEQIR RRGEKDGGAC
201: PTPYACNKMI FISYSKW

Best Arabidopsis Sequence Match ( AT1G15760.1 )
(BLAST)

001: MEDWWFSWLS RTNLEPSLIH EYGLSFSQNE LEHEDISYFD HEFLQSMGIS IAKHRLEILK LARRDRKNSP PLTSRSISRV VTAIKKTRKC LSDHVRAWIR
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT

Arabidopsis Description

At1g15760 [Source:UniProtKB/TrEMBL;Acc:Q9LMQ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.