Factsheet for TraesCS7A01G515500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular, cytosol

Predictor Summary:

extracellular 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G026900.1
TraesCS2A01G197700.1
TraesCS2B01G040200.1
TraesCS2B01G225100.1
TraesCS2D01G029000.1
TraesCS2D01G205700.1
TraesCS4A01G272200.1
TraesCS4A01G415500.1
TraesCS4B01G041800.1
TraesCS4B01G316300.1
TraesCS4D01G039000.1
TraesCS4D01G312900.1
TraesCS7A01G190000.1
TraesCS7B01G095100.1
TraesCS7D01G191200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G15760.1	TraesCS7A01G190000.1	AT3G20510.1	21798944
AT1G15760.1	TraesCS7B01G095100.1	AT3G20510.1	21798944
AT1G15760.1	TraesCS7D01G191200.1	AT3G20510.1	21798944
AT1G15760.1	TraesCS4A01G272200.1	AT4G09580.1	21798944
AT1G15760.1	TraesCS4B01G041800.1	AT4G09580.1	21798944
AT1G15760.1	TraesCS4D01G039000.1	AT4G09580.1	21798944
AT1G15760.1	TraesCS2A01G197700.1	AT4G14950.1	21798944
AT1G15760.1	TraesCS2B01G225100.1	AT4G14950.1	21798944
AT1G15760.1	TraesCS2D01G205700.1	AT4G14950.1	21798944
AT1G15760.1	TraesCS2A01G026900.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS2B01G040200.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS2D01G029000.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS4A01G415500.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS4B01G316300.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS4D01G312900.1	AT5G43460.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G506000.1	Wheat	cytosol, extracellular, mitochondrion	94.5	94.93
TraesCS7B01G432100.1	Wheat	cytosol	88.53	93.24
HORVU7Hr1G115240.1	Barley	cytosol, extracellular, mitochondrion	87.61	92.27
HORVU7Hr1G049610.2	Barley	cytosol, extracellular, plastid	84.86	90.24
Os06t0645500-01	Rice	cytosol, nucleus, peroxisome	66.51	60.92
EER90109	Sorghum	nucleus	59.63	58.56
Zm00001d046580_P001	Maize	cytosol	54.13	55.92
Zm00001d036740_P001	Maize	cytosol	49.54	53.73
Bra035174.1-P	Field mustard	cytosol	25.69	31.64
CDX87319	Canola	cytosol	25.69	31.64
GSMUA_Achr9P26950_001	Banana	cytosol	22.02	31.17
CDY39968	Canola	cytosol	25.23	31.07
TraesCS2A01G518900.1	Wheat	cytosol	28.9	30.0
CDX67952	Canola	cytosol	25.69	29.95
PGSC0003DMT400073435	Potato	cytosol	26.15	29.84
TraesCS7A01G141900.1	Wheat	cytosol	31.19	29.57
GSMUA_Achr8P25150_001	Banana	cytosol	25.69	29.47
Bra003571.1-P	Field mustard	cytosol	25.23	29.41
KRH23610	Soybean	cytosol	25.69	29.17
AT1G80520.1	Thale cress	nucleus	25.69	29.17
OQU80824	Sorghum	plastid	27.06	29.06
CDX79380	Canola	cytosol	25.69	28.87
KRH09696	Soybean	cytosol	25.69	28.57
Solyc06g068310.1.1	Tomato	cytosol	24.77	27.98
GSMUA_Achr8P14710_001	Banana	cytosol	22.48	27.84
Solyc03g117340.1.1	Tomato	cytosol	22.94	27.62
GSMUA_Achr1P09970_001	Banana	cytosol	24.31	27.6
GSMUA_Achr4P09380_001	Banana	cytosol	23.85	27.51
PGSC0003DMT400084778	Potato	nucleus	22.94	26.74
AT1G15760.1	Thale cress	nucleus	24.77	26.73
GSMUA_Achr8P17040_001	Banana	cytosol	21.56	26.7
Bra026110.1-P	Field mustard	cytosol	24.31	26.24
CDY36586	Canola	nucleus	24.31	26.24
CDY61373	Canola	cytosol	23.85	25.74
PGSC0003DMT400073434	Potato	cytosol	15.14	24.63
VIT_09s0002g08420.t01	Wine grape	golgi, plasma membrane	25.23	23.4
PGSC0003DMT400036834	Potato	nucleus	22.48	23.33
Solyc03g117310.1.1	Tomato	cytosol	22.48	23.33
KRH47406	Soybean	cytosol	21.1	22.66
KRH44503	Soybean	cytosol	21.1	21.2
PGSC0003DMT400078859	Potato	cytosol	24.31	20.95
Solyc07g007350.1.1	Tomato	cytosol	24.31	20.78
VIT_11s0118g00550.t01	Wine grape	cytosol	23.85	20.72
CDX93107	Canola	cytosol	22.48	19.76
CDY50403	Canola	cytosol	22.48	19.76
Bra013153.1-P	Field mustard	cytosol	22.48	19.76
AT2G12462.1	Thale cress	cytosol	22.02	19.28
KRH20227	Soybean	cytosol	22.02	16.27
KRH12842	Soybean	cytosol, nucleus, plastid	20.64	15.85
KRH03583	Soybean	nucleus	22.02	15.09
KRH37823	Soybean	nucleus	19.72	14.68

Protein Annotations

EnsemblPlants:TraesCS7A01G515500.1	EnsemblPlantsGene:TraesCS7A01G515500	Gene3D:1.10.150.50	InterPro:SAM/pointed_sf	PANTHER:PTHR33915	PANTHER:PTHR33915:SF4
SEG:seg	SUPFAM:SSF47769	TIGR:cd09487	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr7A:+:701149419..701150075

Molecular Weight (calculated)

22775.7 Da

IEP (calculated)

7.249

GRAVY (calculated)

-0.326

Length

218 amino acids

Sequence
(BLAST)

001: MDWYAWLSKA GLTSAATYQY GLLFSENELE PGDAPDFDHD LLKSMGIAVA KHRLEILKLA RKDAAAAAAS QSSSSAAARL ARRAGRCIAR CARRLGGGAG
101: GPGGRRYSSS SVTVVPRICN GAAGDVVVRA GAVRRRSSVK KMVLMITDGG VASGVGGGGG VRFSGSQKAS LMFQDCAYED EEDDGAGEED EERCSDGGTA
201: GGQSEIKWDS MFQDLKPT

Best Arabidopsis Sequence Match ( AT1G80520.1 )
(BLAST)

001: MDWFSWLSRT NLEASLIYEY GLSFSNNELE YEDIAYFNHE FLQSMGISIA KHRLEILKLA RRDRKPSPLT ARSIFRVLIA IKKTGKCFSE HVRAWIRREE
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT

Arabidopsis Description

Sterile alpha motif (SAM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M8M0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.