Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078859 | Potato | cytosol | 95.69 | 96.44 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 25.1 | 41.56 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 29.02 | 38.54 |
| Solyc06g068310.1.1 | Tomato | cytosol | 29.02 | 38.34 |
| Solyc03g117340.1.1 | Tomato | cytosol | 26.67 | 37.57 |
| VIT_11s0118g00550.t01 | Wine grape | cytosol | 36.86 | 37.45 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 26.67 | 35.79 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 23.92 | 34.66 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 23.53 | 34.09 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 25.1 | 33.86 |
| Solyc03g117310.1.1 | Tomato | cytosol | 27.45 | 33.33 |
| KRH12842 | Soybean | cytosol, nucleus, plastid | 36.47 | 32.75 |
| KRH37823 | Soybean | nucleus | 36.86 | 32.08 |
| Os04t0644100-01 | Rice | cytosol | 23.14 | 31.38 |
| KRH20227 | Soybean | cytosol | 35.69 | 30.85 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 23.53 | 30.15 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 23.14 | 28.1 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 22.75 | 27.88 |
| EES11537 | Sorghum | cytosol | 20.0 | 27.42 |
| KRH03583 | Soybean | nucleus | 34.12 | 27.36 |
| Zm00001d002096_P001 | Maize | cytosol | 21.18 | 26.34 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 21.96 | 25.81 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 20.78 | 25.6 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 20.39 | 25.12 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 20.0 | 24.88 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 10.98 | 24.78 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 20.78 | 24.31 |
| Zm00001d046580_P001 | Maize | cytosol | 19.61 | 23.7 |
| Zm00001d036740_P001 | Maize | cytosol | 18.43 | 23.38 |
| EER90109 | Sorghum | nucleus | 20.0 | 22.97 |
| AT2G12462.1 | Thale cress | cytosol | 22.35 | 22.89 |
| CDY50403 | Canola | cytosol | 21.57 | 22.18 |
| CDX93107 | Canola | cytosol | 21.57 | 22.18 |
| Bra013153.1-P | Field mustard | cytosol | 21.57 | 22.18 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 20.39 | 21.85 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 19.22 | 21.4 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 19.22 | 21.12 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 20.0 | 20.99 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 18.82 | 20.6 |
| OQU75953 | Sorghum | cytosol | 21.18 | 20.45 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 18.43 | 20.43 |
| Zm00001d045137_P001 | Maize | plastid | 11.76 | 17.54 |
| OQU80824 | Sorghum | plastid | 11.76 | 14.78 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 14.51 | 12.21 |
Protein Annotations
| EnsemblPlants:Solyc07g007350.1.1 | EnsemblPlantsGene:Solyc07g007350.1 | Gene3D:1.10.150.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001660 | InterPro:SAM | InterPro:SAM/pointed_sf | PANTHER:PTHR33915 | PANTHER:PTHR33915:SF3 | PFAM:PF07647 |
| SEG:seg | SUPFAM:SSF47769 | UniParc:UPI000276ABD9 | UniProt:K4CBK5 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr7:-:2091112..2091879
Molecular Weight (calculated)
29008.1 Da
IEP (calculated)
10.373
GRAVY (calculated)
-0.589
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNMDWYSWL SKSSLDQELI YEYGLVFSRN ELQKEDLIYF NHEFLQSMGI IVAKHRLEIL KLARKEGGGG IGGGGTSSSS NGLSRLVLAI NKTKKLLAKN
101: LSKLSIHRVS TRLALSELKP YRTQWTGALR KLESSKEEKA IVTTRSMIMN SGPLDRRMQD KFMATNRNLS ASGPLDGRVL QEKLMYPNRS PMKSGPLDRR
201: YKDSAVYPSR INKSGPLDAM GYNSPRVNHY NQEMMPDDGV IYSQWSLMFQ DMKPT
101: LSKLSIHRVS TRLALSELKP YRTQWTGALR KLESSKEEKA IVTTRSMIMN SGPLDRRMQD KFMATNRNLS ASGPLDGRVL QEKLMYPNRS PMKSGPLDRR
201: YKDSAVYPSR INKSGPLDAM GYNSPRVNHY NQEMMPDDGV IYSQWSLMFQ DMKPT
001: MDWFSWLSKT DLDPTLSYEY GLIFAQKKLQ GEDIALFNHN FLRRLGVTVT KHRVEILKLS KRETQALSSY NHRPVSAKLI SVVIKATKSV GNRLNKWLSL
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
Arabidopsis Description
Sterile alpha motif (SAM) domain protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.