Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G038330.2 | |
| HORVU2Hr1G046220.7 | |
| HORVU4Hr1G006740.1 | |
| HORVU4Hr1G080140.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 92.75 | 93.66 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 91.3 | 91.3 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 92.27 | 88.02 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 92.27 | 87.61 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 69.57 | 60.5 |
| EER90109 | Sorghum | nucleus | 62.8 | 58.56 |
| Zm00001d046580_P001 | Maize | cytosol | 57.49 | 56.4 |
| Zm00001d036740_P001 | Maize | cytosol | 50.24 | 51.74 |
| CDX87319 | Canola | cytosol | 27.54 | 32.2 |
| Bra035174.1-P | Field mustard | cytosol | 27.54 | 32.2 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 23.67 | 31.82 |
| CDY39968 | Canola | cytosol | 27.05 | 31.64 |
| CDX67952 | Canola | cytosol | 28.02 | 31.02 |
| Bra003571.1-P | Field mustard | cytosol | 27.54 | 30.48 |
| PGSC0003DMT400073435 | Potato | cytosol | 28.02 | 30.37 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 27.54 | 30.0 |
| CDX79380 | Canola | cytosol | 28.02 | 29.9 |
| AT1G80520.1 | Thale cress | nucleus | 27.05 | 29.17 |
| KRH09696 | Soybean | cytosol | 27.54 | 29.08 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 24.64 | 28.98 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 32.37 | 28.76 |
| KRH23610 | Soybean | cytosol | 26.57 | 28.65 |
| OQU80824 | Sorghum | plastid | 28.02 | 28.57 |
| Solyc06g068310.1.1 | Tomato | cytosol | 26.57 | 28.5 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 15.46 | 28.32 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 26.09 | 28.12 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 25.6 | 28.04 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 23.67 | 27.84 |
| AT1G15760.1 | Thale cress | nucleus | 27.05 | 27.72 |
| Solyc03g117340.1.1 | Tomato | cytosol | 24.15 | 27.62 |
| PGSC0003DMT400084778 | Potato | nucleus | 24.64 | 27.27 |
| PGSC0003DMT400073434 | Potato | cytosol | 17.39 | 26.87 |
| CDY61373 | Canola | cytosol | 25.6 | 26.24 |
| Bra026110.1-P | Field mustard | cytosol | 25.6 | 26.24 |
| CDY36586 | Canola | nucleus | 25.6 | 26.24 |
| VIT_09s0002g08420.t01 | Wine grape | golgi, plasma membrane | 28.02 | 24.68 |
| Solyc03g117310.1.1 | Tomato | cytosol | 23.67 | 23.33 |
| PGSC0003DMT400036834 | Potato | nucleus | 23.67 | 23.33 |
| KRH47406 | Soybean | cytosol | 22.22 | 22.66 |
| KRH44503 | Soybean | cytosol | 22.71 | 21.66 |
| VIT_11s0118g00550.t01 | Wine grape | cytosol | 26.09 | 21.51 |
| PGSC0003DMT400078859 | Potato | cytosol | 25.6 | 20.95 |
| Solyc07g007350.1.1 | Tomato | cytosol | 25.6 | 20.78 |
| CDY50403 | Canola | cytosol | 24.15 | 20.16 |
| CDX93107 | Canola | cytosol | 24.15 | 20.16 |
| Bra013153.1-P | Field mustard | cytosol | 24.15 | 20.16 |
| AT2G12462.1 | Thale cress | cytosol | 23.19 | 19.28 |
| KRH12842 | Soybean | cytosol, nucleus, plastid | 23.19 | 16.9 |
| KRH20227 | Soybean | cytosol | 23.67 | 16.61 |
| KRH03583 | Soybean | nucleus | 23.67 | 15.41 |
| KRH37823 | Soybean | nucleus | 21.74 | 15.36 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G115240.1 | EnsemblPlantsGene:HORVU7Hr1G115240 | Gene3D:1.10.150.50 | PANTHER:PTHR33915 | PANTHER:PTHR33915:SF4 | SEG:seg |
| UniParc:UPI000B47C866 | UniProt:A0A287XW43 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:641059313..641060613
Molecular Weight (calculated)
22010.9 Da
IEP (calculated)
6.912
GRAVY (calculated)
-0.318
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWYAWLSKA GLTPAATYEY GLLFSENELE PGDAPDFDHD LLKSMGIAVA KHRLEILKLA RKDAAAAAAS SHSSSAAARL ARMAGRCIAR CARRLGGGRR
101: YSSSSVTVVP RICNGAAGDV VVRAGAVRRR SSVKKMVLMI TDGGVASGGG VRFSGSQKAS LMFQDCAYDD HDGAGEEEEE ERCSDGGNAG GESEIKWDSM
201: FQDLKPT
101: YSSSSVTVVP RICNGAAGDV VVRAGAVRRR SSVKKMVLMI TDGGVASGGG VRFSGSQKAS LMFQDCAYDD HDGAGEEEEE ERCSDGGNAG GESEIKWDSM
201: FQDLKPT
001: MDWFSWLSRT NLEASLIYEY GLSFSNNELE YEDIAYFNHE FLQSMGISIA KHRLEILKLA RRDRKPSPLT ARSIFRVLIA IKKTGKCFSE HVRAWIRREE
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT
Arabidopsis Description
Sterile alpha motif (SAM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M8M0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.