Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36586 | Canola | nucleus | 77.72 | 77.72 |
| CDY61373 | Canola | cytosol | 77.72 | 77.72 |
| Bra026110.1-P | Field mustard | cytosol | 77.23 | 77.23 |
| AT1G80520.1 | Thale cress | nucleus | 64.85 | 68.23 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 37.13 | 48.7 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 35.15 | 40.34 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 34.16 | 39.2 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 36.14 | 38.42 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 35.15 | 37.57 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 35.64 | 37.5 |
| Os04t0644100-01 | Rice | cytosol | 26.73 | 28.72 |
| Zm00001d046580_P001 | Maize | cytosol | 29.21 | 27.96 |
| Zm00001d036740_P001 | Maize | cytosol | 27.72 | 27.86 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 15.35 | 27.43 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 27.72 | 27.32 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 27.72 | 27.05 |
| EES11537 | Sorghum | cytosol | 24.75 | 26.88 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 27.23 | 26.57 |
| EER90109 | Sorghum | nucleus | 28.71 | 26.13 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 27.72 | 25.81 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 26.73 | 24.77 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 24.26 | 24.62 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 25.25 | 24.52 |
| Zm00001d002096_P001 | Maize | cytosol | 24.75 | 24.39 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 25.25 | 24.29 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 27.72 | 23.53 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 23.27 | 20.52 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 23.27 | 20.43 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 24.26 | 20.16 |
| AT2G12462.1 | Thale cress | cytosol | 24.26 | 19.68 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 21.78 | 18.97 |
| OQU75953 | Sorghum | cytosol | 24.75 | 18.94 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 21.78 | 18.88 |
| Zm00001d045137_P001 | Maize | plastid | 14.36 | 16.96 |
| OQU80824 | Sorghum | plastid | 14.85 | 14.78 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 17.82 | 11.88 |
Protein Annotations
| Gene3D:1.10.150.50 | MapMan:35.2 | EntrezGene:838145 | ProteinID:AAF82146.1 | ProteinID:AEE29361.1 | ArrayExpress:AT1G15760 |
| EnsemblPlantsGene:AT1G15760 | RefSeq:AT1G15760 | TAIR:AT1G15760 | RefSeq:AT1G15760-TAIR-G | EnsemblPlants:AT1G15760.1 | TAIR:AT1G15760.1 |
| EMBL:BT030083 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | InterPro:IPR001660 |
| RefSeq:NP_173028.1 | PFAM:PF07647 | PANTHER:PTHR33915 | PANTHER:PTHR33915:SF1 | UniProt:Q9LMQ8 | InterPro:SAM |
| InterPro:SAM/pointed_sf | SUPFAM:SSF47769 | UniParc:UPI00000AAA12 | : | : | : |
Description
At1g15760 [Source:UniProtKB/TrEMBL;Acc:Q9LMQ8]
Coordinates
chr1:+:5425616..5426666
Molecular Weight (calculated)
23595.1 Da
IEP (calculated)
9.952
GRAVY (calculated)
-0.689
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDWWFSWLS RTNLEPSLIH EYGLSFSQNE LEHEDISYFD HEFLQSMGIS IAKHRLEILK LARRDRKNSP PLTSRSISRV VTAIKKTRKC LSDHVRAWIR
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.