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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:
  • extracellular 1
  • plastid 1
  • cytosol 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU7Hr1G115240.1 Barley cytosol, extracellular, mitochondrion 93.66 92.75
TraesCS7B01G432100.1 Wheat cytosol 89.76 88.89
TraesCS7D01G506000.1 Wheat cytosol, extracellular, mitochondrion 91.71 86.64
TraesCS7A01G515500.1 Wheat cytosol, extracellular, mitochondrion 90.24 84.86
Os06t0645500-01 Rice cytosol, nucleus, peroxisome 68.78 59.24
EER90109 Sorghum nucleus 62.93 58.11
Zm00001d046580_P001 Maize cytosol 57.56 55.92
Zm00001d036740_P001 Maize cytosol 50.24 51.24
Bra035174.1-P Field mustard cytosol 28.29 32.77
CDX87319 Canola cytosol 28.29 32.77
GSMUA_Achr9P26950_001 Banana cytosol 24.39 32.47
CDY39968 Canola cytosol 27.8 32.2
CDX67952 Canola cytosol 29.27 32.09
Bra003571.1-P Field mustard cytosol 28.78 31.55
AT1G80520.1 Thale cress nucleus 28.78 30.73
CDX79380 Canola cytosol 28.78 30.41
PGSC0003DMT400073435 Potato cytosol 28.29 30.37
KRH23610 Soybean cytosol 27.8 29.69
Solyc06g068310.1.1 Tomato cytosol 27.8 29.53
GSMUA_Achr8P25150_001 Banana cytosol 27.32 29.47
KRH09696 Soybean cytosol 27.8 29.08
Solyc03g117340.1.1 Tomato cytosol 25.37 28.73
OQU80824 Sorghum plastid 28.29 28.57
GSMUA_Achr8P14710_001 Banana cytosol 24.39 28.41
HORVU7Hr1G029260.1 Barley cytosol 32.2 28.33
HORVU2Hr1G114860.1 Barley mitochondrion 15.61 28.32
GSMUA_Achr1P09970_001 Banana cytosol 26.34 28.12
GSMUA_Achr4P09380_001 Banana cytosol 25.85 28.04
AT1G15760.1 Thale cress nucleus 27.32 27.72
PGSC0003DMT400084778 Potato nucleus 24.88 27.27
GSMUA_Achr8P17040_001 Banana cytosol 23.41 27.27
CDY36586 Canola nucleus 25.85 26.24
Bra026110.1-P Field mustard cytosol 25.85 26.24
CDY61373 Canola cytosol 25.85 26.24
PGSC0003DMT400073434 Potato cytosol 17.07 26.12
VIT_09s0002g08420.t01 Wine grape golgi, plasma membrane 28.29 24.68
KRH47406 Soybean cytosol 22.93 23.15
Solyc03g117310.1.1 Tomato cytosol 23.41 22.86
PGSC0003DMT400036834 Potato nucleus 23.41 22.86
KRH44503 Soybean cytosol 22.93 21.66
VIT_11s0118g00550.t01 Wine grape cytosol 26.34 21.51
PGSC0003DMT400078859 Potato cytosol 24.88 20.16
Solyc07g007350.1.1 Tomato cytosol 24.88 20.0
CDY50403 Canola cytosol 23.9 19.76
CDX93107 Canola cytosol 23.9 19.76
Bra013153.1-P Field mustard cytosol 23.9 19.76
AT2G12462.1 Thale cress cytosol 23.41 19.28
KRH20227 Soybean cytosol 24.39 16.95
KRH12842 Soybean cytosol, nucleus, plastid 22.44 16.2
KRH03583 Soybean nucleus 23.9 15.41
KRH37823 Soybean nucleus 21.46 15.02
Protein Annotations
EMBL:AK354781EnsemblPlants:HORVU7Hr1G049610.2EnsemblPlantsGene:HORVU7Hr1G049610Gene3D:1.10.150.50PANTHER:PTHR33915PANTHER:PTHR33915:SF4
SEG:segUniParc:UPI0002004822UniProt:F2CT29MapMan:35.2::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CT29]
Coordinates
chrchr7H:+:174836507..174837783
Molecular Weight (calculated)
21751.6 Da
IEP (calculated)
7.342
GRAVY (calculated)
-0.300
Length
205 amino acids
Sequence
(BLAST)
001: MDWYAWLSKA GLTPAATYEY GLLFSENELE PGDAPDFDHD LLKSMGIAVA KHRLEILKLA RKDAAAVASS HSSAAAQLAR RAGRCIARCA RRLGGGRRYS
101: SSSVTVVPRI CNGAAGDVVV RAGAVRRRSS VKKMVLMITD GGVASGGGVR FSGSQKASLI FQDCAYDDDN GAGEEGDEER CSEGGTAGGE SEIKWDSMFQ
201: DLKPT
Best Arabidopsis Sequence Match ( AT1G80520.1 )
(BLAST)
001: MDWFSWLSRT NLEASLIYEY GLSFSNNELE YEDIAYFNHE FLQSMGISIA KHRLEILKLA RRDRKPSPLT ARSIFRVLIA IKKTGKCFSE HVRAWIRREE
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT
Arabidopsis Description
Sterile alpha motif (SAM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M8M0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.