Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93107 | Canola | cytosol | 98.79 | 98.79 |
| Bra013153.1-P | Field mustard | cytosol | 97.98 | 97.98 |
| AT2G12462.1 | Thale cress | cytosol | 79.44 | 79.12 |
| Zm00001d036740_P001 | Maize | cytosol | 22.18 | 27.36 |
| EES11537 | Sorghum | cytosol | 20.16 | 26.88 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 16.53 | 26.62 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 20.56 | 26.56 |
| CDX87319 | Canola | cytosol | 18.95 | 26.55 |
| CDY39968 | Canola | cytosol | 18.95 | 26.55 |
| Zm00001d046580_P001 | Maize | cytosol | 22.18 | 26.07 |
| EER90109 | Sorghum | nucleus | 22.98 | 25.68 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 19.35 | 25.4 |
| Zm00001d002096_P001 | Maize | cytosol | 20.97 | 25.37 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 19.35 | 25.26 |
| CDX67952 | Canola | cytosol | 18.95 | 25.13 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 17.74 | 25.0 |
| Os04t0644100-01 | Rice | cytosol | 18.95 | 25.0 |
| CDX79380 | Canola | cytosol | 19.35 | 24.74 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 20.16 | 24.15 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 19.76 | 23.9 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 16.94 | 23.86 |
| CDY61373 | Canola | cytosol | 19.35 | 23.76 |
| CDY36586 | Canola | nucleus | 19.35 | 23.76 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 19.76 | 23.67 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 20.56 | 23.5 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 22.18 | 23.11 |
| VIT_11s0118g00550.t01 | Wine grape | cytosol | 22.98 | 22.71 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 18.15 | 22.61 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 19.76 | 22.48 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 18.95 | 22.38 |
| PGSC0003DMT400078859 | Potato | cytosol | 22.58 | 22.13 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 18.55 | 22.12 |
| Solyc07g007350.1.1 | Tomato | cytosol | 22.18 | 21.57 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 19.35 | 20.87 |
| KRH12842 | Soybean | cytosol, nucleus, plastid | 23.79 | 20.77 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 20.16 | 20.58 |
| KRH37823 | Soybean | nucleus | 23.79 | 20.14 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 18.15 | 19.65 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 8.87 | 19.47 |
| KRH20227 | Soybean | cytosol | 22.18 | 18.64 |
| Zm00001d045137_P001 | Maize | plastid | 12.5 | 18.13 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 16.94 | 18.03 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 16.53 | 17.67 |
| OQU75953 | Sorghum | cytosol | 18.15 | 17.05 |
| KRH03583 | Soybean | nucleus | 21.77 | 16.98 |
| OQU80824 | Sorghum | plastid | 12.1 | 14.78 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 15.32 | 12.54 |
Protein Annotations
| EnsemblPlants:CDY50403 | EnsemblPlantsGene:GSBRNA2T00096634001 | Gene3D:1.10.150.50 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001660 | InterPro:SAM | PANTHER:PTHR33915 | PANTHER:PTHR33915:SF3 | PFAM:PF07647 | ProteinID:CDY50403 |
| ProteinID:CDY50403.1 | UniParc:UPI0004EEACA1 | UniProt:A0A078IN01 | MapMan:35.2 | : | : |
Description
BnaC03g45150DBnaC03g45150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IN01]
Coordinates
chrLK032907:+:2223..3702
Molecular Weight (calculated)
28358.1 Da
IEP (calculated)
10.669
GRAVY (calculated)
-0.656
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWFSWLSKT DLDPTISYEY GLIFAQKKLR SEDIALFNHN FLKRHGINVA EHRQEILKLS KRETETLSYY HRRPASAKLI SVLIKATKSI GSRFNKWLFL
101: VGTAVVEPAK EKQSPEPASR GEAFVSGNNK ANNEKAEFQV ERLPVIRKKR IAKSGPLDLK HRMQEKTKFP ANRSMNLSGP LDRSVQERLV LAYRSPVVSG
201: QLDGNLNERL KLSGPLKGRP PSPSVYVEYS KRDDDTRWAA LFHNLKPT
101: VGTAVVEPAK EKQSPEPASR GEAFVSGNNK ANNEKAEFQV ERLPVIRKKR IAKSGPLDLK HRMQEKTKFP ANRSMNLSGP LDRSVQERLV LAYRSPVVSG
201: QLDGNLNERL KLSGPLKGRP PSPSVYVEYS KRDDDTRWAA LFHNLKPT
001: MDWFSWLSKT DLDPTLSYEY GLIFAQKKLQ GEDIALFNHN FLRRLGVTVT KHRVEILKLS KRETQALSSY NHRPVSAKLI SVVIKATKSV GNRLNKWLSL
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
Arabidopsis Description
Sterile alpha motif (SAM) domain protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.