Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003571.1-P | Field mustard | cytosol | 97.86 | 97.86 |
| CDX79380 | Canola | cytosol | 83.96 | 80.93 |
| AT1G80520.1 | Thale cress | nucleus | 77.01 | 75.0 |
| CDY39968 | Canola | cytosol | 68.98 | 72.88 |
| CDX87319 | Canola | cytosol | 68.45 | 72.32 |
| CDY36586 | Canola | nucleus | 66.84 | 61.88 |
| CDY61373 | Canola | cytosol | 65.78 | 60.89 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 40.64 | 49.35 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 41.18 | 43.75 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 38.5 | 40.91 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 40.64 | 40.0 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 39.04 | 38.62 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 37.97 | 36.98 |
| Os04t0644100-01 | Rice | cytosol | 30.48 | 30.32 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 32.09 | 29.27 |
| EES11537 | Sorghum | cytosol | 28.88 | 29.03 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 31.02 | 28.02 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 31.02 | 28.02 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 31.02 | 26.73 |
| EER90109 | Sorghum | nucleus | 31.55 | 26.58 |
| Zm00001d046580_P001 | Maize | cytosol | 29.41 | 26.07 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 29.95 | 25.69 |
| Zm00001d036740_P001 | Maize | cytosol | 27.27 | 25.37 |
| Zm00001d002096_P001 | Maize | cytosol | 27.81 | 25.37 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 14.44 | 23.89 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 29.95 | 23.53 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 26.2 | 23.33 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 24.6 | 23.12 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 25.67 | 23.08 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 26.2 | 20.16 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 24.6 | 20.09 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 24.6 | 20.0 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 24.6 | 19.83 |
| OQU75953 | Sorghum | cytosol | 27.27 | 19.32 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 24.06 | 19.31 |
| CDX93107 | Canola | cytosol | 25.13 | 18.95 |
| CDY50403 | Canola | cytosol | 25.13 | 18.95 |
| Zm00001d045137_P001 | Maize | plastid | 15.51 | 16.96 |
| OQU80824 | Sorghum | plastid | 17.11 | 15.76 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 18.72 | 11.55 |
Protein Annotations
| EnsemblPlants:CDX67952 | EnsemblPlantsGene:GSBRNA2T00099163001 | Gene3D:1.10.150.50 | InterPro:SAM/pointed_sf | PANTHER:PTHR33915 | PANTHER:PTHR33915:SF1 |
| ProteinID:CDX67952 | ProteinID:CDX67952.1 | SUPFAM:SSF47769 | UniParc:UPI0004EE9DED | MapMan:35.2 | : |
Description
BnaA07g19920D
Coordinates
chrLK031787:+:3078071..3078739
Molecular Weight (calculated)
21675.9 Da
IEP (calculated)
9.604
GRAVY (calculated)
-0.561
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWFSWLSRT NLEDSLIYEY GLSFSHNELE YEDISYFNHE FLQSMGISIA KHRLEILKLA RRDKKPSPLT ARSISRVLVA IRKTGKCFSE YVRAWIRREE
101: SSRALVVVPR SSGNGRWKGA LMKRNKRSVT PSSGLKEERL LLTNGTPCRL ESFSSSTVLD YGLKEEKGCD VEEEIKWDSM FQNLKPT
101: SSRALVVVPR SSGNGRWKGA LMKRNKRSVT PSSGLKEERL LLTNGTPCRL ESFSSSTVLD YGLKEEKGCD VEEEIKWDSM FQNLKPT
001: MDWFSWLSRT NLEASLIYEY GLSFSNNELE YEDIAYFNHE FLQSMGISIA KHRLEILKLA RRDRKPSPLT ARSIFRVLIA IKKTGKCFSE HVRAWIRREE
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT
Arabidopsis Description
Sterile alpha motif (SAM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M8M0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.