Factsheet for TraesCS7B01G432100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular
MultiLoc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G026900.1
TraesCS2A01G197700.1
TraesCS2B01G040200.1
TraesCS2B01G225100.1
TraesCS2D01G029000.1
TraesCS2D01G205700.1
TraesCS4A01G272200.1
TraesCS4A01G415500.1
TraesCS4B01G041800.1
TraesCS4B01G316300.1
TraesCS4D01G039000.1
TraesCS4D01G312900.1
TraesCS7A01G190000.1
TraesCS7B01G095100.1
TraesCS7D01G191200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G15760.1	TraesCS7A01G190000.1	AT3G20510.1	21798944
AT1G15760.1	TraesCS7B01G095100.1	AT3G20510.1	21798944
AT1G15760.1	TraesCS7D01G191200.1	AT3G20510.1	21798944
AT1G15760.1	TraesCS4A01G272200.1	AT4G09580.1	21798944
AT1G15760.1	TraesCS4B01G041800.1	AT4G09580.1	21798944
AT1G15760.1	TraesCS4D01G039000.1	AT4G09580.1	21798944
AT1G15760.1	TraesCS2A01G197700.1	AT4G14950.1	21798944
AT1G15760.1	TraesCS2B01G225100.1	AT4G14950.1	21798944
AT1G15760.1	TraesCS2D01G205700.1	AT4G14950.1	21798944
AT1G15760.1	TraesCS2A01G026900.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS2B01G040200.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS2D01G029000.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS4A01G415500.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS4B01G316300.1	AT5G43460.1	21798944
AT1G15760.1	TraesCS4D01G312900.1	AT5G43460.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G115240.1	Barley	cytosol, extracellular, mitochondrion	91.3	91.3
TraesCS7D01G506000.1	Wheat	cytosol, extracellular, mitochondrion	94.69	90.32
HORVU7Hr1G049610.2	Barley	cytosol, extracellular, plastid	88.89	89.76
TraesCS7A01G515500.1	Wheat	cytosol, extracellular, mitochondrion	93.24	88.53
Os06t0645500-01	Rice	cytosol, nucleus, peroxisome	70.53	61.34
EER90109	Sorghum	nucleus	62.8	58.56
Zm00001d046580_P001	Maize	cytosol	57.97	56.87
Zm00001d036740_P001	Maize	cytosol	50.72	52.24
CDX87319	Canola	cytosol	27.54	32.2
Bra035174.1-P	Field mustard	cytosol	27.54	32.2
GSMUA_Achr9P26950_001	Banana	cytosol	23.67	31.82
CDY39968	Canola	cytosol	27.05	31.64
GSMUA_Achr8P25150_001	Banana	cytosol	28.5	31.05
CDX67952	Canola	cytosol	28.02	31.02
Bra003571.1-P	Field mustard	cytosol	28.02	31.02
TraesCS2B01G547200.1	Wheat	cytosol	29.47	30.65
PGSC0003DMT400073435	Potato	cytosol	28.02	30.37
CDX79380	Canola	cytosol	28.02	29.9
TraesCS7B01G044000.1	Wheat	cytosol	32.85	29.69
AT1G80520.1	Thale cress	nucleus	27.54	29.69
KRH09696	Soybean	cytosol	27.54	29.08
OQU80824	Sorghum	plastid	28.5	29.06
GSMUA_Achr8P14710_001	Banana	cytosol	24.64	28.98
KRH23610	Soybean	cytosol	26.57	28.65
Solyc06g068310.1.1	Tomato	cytosol	26.57	28.5
Solyc03g117340.1.1	Tomato	cytosol	24.64	28.18
GSMUA_Achr8P17040_001	Banana	cytosol	23.67	27.84
GSMUA_Achr4P09380_001	Banana	cytosol	25.12	27.51
PGSC0003DMT400084778	Potato	nucleus	24.64	27.27
AT1G15760.1	Thale cress	nucleus	26.57	27.23
GSMUA_Achr1P09970_001	Banana	cytosol	25.12	27.08
Bra026110.1-P	Field mustard	cytosol	26.09	26.73
CDY36586	Canola	nucleus	26.09	26.73
CDY61373	Canola	cytosol	25.6	26.24
PGSC0003DMT400073434	Potato	cytosol	16.43	25.37
VIT_09s0002g08420.t01	Wine grape	golgi, plasma membrane	27.05	23.83
KRH47406	Soybean	cytosol	22.22	22.66
Solyc03g117310.1.1	Tomato	cytosol	22.71	22.38
PGSC0003DMT400036834	Potato	nucleus	22.71	22.38
KRH44503	Soybean	cytosol	22.22	21.2
VIT_11s0118g00550.t01	Wine grape	cytosol	25.12	20.72
PGSC0003DMT400078859	Potato	cytosol	25.12	20.55
Solyc07g007350.1.1	Tomato	cytosol	25.12	20.39
CDY50403	Canola	cytosol	23.67	19.76
CDX93107	Canola	cytosol	23.67	19.76
Bra013153.1-P	Field mustard	cytosol	23.67	19.76
AT2G12462.1	Thale cress	cytosol	23.67	19.68
KRH20227	Soybean	cytosol	23.19	16.27
KRH12842	Soybean	cytosol, nucleus, plastid	22.22	16.2
KRH03583	Soybean	nucleus	23.19	15.09
KRH37823	Soybean	nucleus	20.77	14.68

Protein Annotations

EnsemblPlants:TraesCS7B01G432100.1	EnsemblPlantsGene:TraesCS7B01G432100	Gene3D:1.10.150.50	PANTHER:PTHR33915	PANTHER:PTHR33915:SF4	SEG:seg
TIGR:cd09487	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:700184178..700184801

Molecular Weight (calculated)

21822.8 Da

IEP (calculated)

8.205

GRAVY (calculated)

-0.244

Length

207 amino acids

Sequence
(BLAST)

001: MDWYAWLAKA GLTPAATYEY GLLFSENELE PGDAPDFDHD LLKSMGIAVA KHRLEILKLA RKDAAAAAAA SHSSSSAAAR LARRAGRCIV RCARRLGGGG
101: AGGRRYSSSS VTVVPRICNG AAGDVVVRAG AVRRRSSVKK MVLMITDGGV GAGAGVRFSG SQKASLMFQD CAYEDEEEDG ERCSDGGTAG GESEIKWDSM
201: FQDLKPT

Best Arabidopsis Sequence Match ( AT1G15760.1 )
(BLAST)

001: MEDWWFSWLS RTNLEPSLIH EYGLSFSQNE LEHEDISYFD HEFLQSMGIS IAKHRLEILK LARRDRKNSP PLTSRSISRV VTAIKKTRKC LSDHVRAWIR
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT

Arabidopsis Description

At1g15760 [Source:UniProtKB/TrEMBL;Acc:Q9LMQ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.