Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400084778 | Potato | nucleus | 90.61 | 87.7 |
| Solyc06g068310.1.1 | Tomato | cytosol | 66.85 | 62.69 |
| KRH09696 | Soybean | cytosol | 55.25 | 51.02 |
| KRH23610 | Soybean | cytosol | 53.59 | 50.52 |
| VIT_09s0002g08420.t01 | Wine grape | golgi, plasma membrane | 60.22 | 46.38 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 39.23 | 46.1 |
| KRH47406 | Soybean | cytosol | 49.17 | 43.84 |
| Solyc03g117310.1.1 | Tomato | cytosol | 47.51 | 40.95 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 42.54 | 40.74 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 38.67 | 39.77 |
| KRH44503 | Soybean | cytosol | 45.86 | 38.25 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 36.46 | 37.5 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 38.67 | 36.46 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 37.02 | 35.26 |
| EES11537 | Sorghum | cytosol | 30.39 | 29.57 |
| Solyc07g007350.1.1 | Tomato | cytosol | 37.57 | 26.67 |
| Os04t0644100-01 | Rice | cytosol | 27.07 | 26.06 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 28.73 | 25.37 |
| Zm00001d002096_P001 | Maize | cytosol | 28.73 | 25.37 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 28.18 | 24.64 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 27.62 | 24.15 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 28.73 | 23.96 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 14.92 | 23.89 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 30.39 | 23.11 |
| EER90109 | Sorghum | nucleus | 28.18 | 22.97 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 27.62 | 22.94 |
| Zm00001d036740_P001 | Maize | cytosol | 25.41 | 22.89 |
| Zm00001d046580_P001 | Maize | cytosol | 26.52 | 22.75 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 24.86 | 22.61 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 25.41 | 21.9 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 24.86 | 21.63 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 25.97 | 20.52 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 24.86 | 19.57 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 24.86 | 19.4 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 25.97 | 19.34 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 24.86 | 19.31 |
| OQU75953 | Sorghum | cytosol | 27.07 | 18.56 |
| Zm00001d045137_P001 | Maize | plastid | 14.92 | 15.79 |
| OQU80824 | Sorghum | plastid | 16.02 | 14.29 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 18.78 | 11.22 |
Protein Annotations
| EnsemblPlants:Solyc03g117340.1.1 | EnsemblPlantsGene:Solyc03g117340.1 | Gene3D:1.10.150.50 | InterPro:SAM/pointed_sf | PANTHER:PTHR33915 | PANTHER:PTHR33915:SF1 |
| SUPFAM:SSF47769 | UniParc:UPI000276769D | UniProt:K4BLN6 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3:-:66490465..66491010
Molecular Weight (calculated)
21094.2 Da
IEP (calculated)
10.180
GRAVY (calculated)
-0.588
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWFSWLSKT ELDPSLVYEY GLALAHNELE YDDVVYFNHE FLQSIGISIG KHRLEILKLA KKERGVIPNS MSRFLQIIKR TKRRLSKYIR NWGHSEELAL
101: ALVPKRISSS RWKNSMLKRR STRVAATKQN TLLITNGSPN FNSDSRMNSF SNGEKTGDDY WASCGVEEIR WDTMFQNLKP T
101: ALVPKRISSS RWKNSMLKRR STRVAATKQN TLLITNGSPN FNSDSRMNSF SNGEKTGDDY WASCGVEEIR WDTMFQNLKP T
001: MDWFSWLSRT NLEASLIYEY GLSFSNNELE YEDIAYFNHE FLQSMGISIA KHRLEILKLA RRDRKPSPLT ARSIFRVLIA IKKTGKCFSE HVRAWIRREE
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT
101: SSRALVVVSR STSSSGNGRW KSARKKRLVM PSNGNGVKEE RLLLTNGTPC RLDSFSNPKV SSGYEDDDNH WGNKDVEEKI KWDSMFQNLK PT
Arabidopsis Description
Sterile alpha motif (SAM) domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9M8M0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.