Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH09696 | Soybean | cytosol | 51.91 | 62.24 |
| Solyc03g117340.1.1 | Tomato | cytosol | 46.38 | 60.22 |
| KRH23610 | Soybean | cytosol | 48.51 | 59.38 |
| PGSC0003DMT400084778 | Potato | nucleus | 46.81 | 58.82 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 37.45 | 57.14 |
| PGSC0003DMT400073435 | Potato | cytosol | 45.96 | 56.54 |
| Solyc06g068310.1.1 | Tomato | cytosol | 46.38 | 56.48 |
| KRH47406 | Soybean | cytosol | 48.09 | 55.66 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 38.72 | 48.15 |
| KRH44503 | Soybean | cytosol | 43.83 | 47.47 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 36.6 | 44.79 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 31.49 | 42.05 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 33.62 | 41.58 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 31.06 | 41.48 |
| VIT_11s0118g00550.t01 | Wine grape | cytosol | 35.74 | 33.47 |
| EES11537 | Sorghum | cytosol | 25.96 | 32.8 |
| Os04t0644100-01 | Rice | cytosol | 24.26 | 30.32 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 13.62 | 28.32 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 24.68 | 28.29 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 24.68 | 28.02 |
| Zm00001d002096_P001 | Maize | cytosol | 24.26 | 27.8 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 23.83 | 27.05 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 24.68 | 26.73 |
| EER90109 | Sorghum | nucleus | 25.11 | 26.58 |
| Zm00001d046580_P001 | Maize | cytosol | 23.83 | 26.54 |
| Zm00001d036740_P001 | Maize | cytosol | 22.55 | 26.37 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 22.55 | 25.48 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 22.55 | 25.24 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 23.4 | 25.23 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 21.28 | 25.13 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 25.11 | 24.79 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 23.4 | 24.02 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 22.55 | 23.04 |
| OQU75953 | Sorghum | cytosol | 25.11 | 22.35 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 22.98 | 22.22 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 21.7 | 21.98 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 20.85 | 21.03 |
| Zm00001d045137_P001 | Maize | plastid | 14.04 | 19.3 |
| OQU80824 | Sorghum | plastid | 14.89 | 17.24 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 18.3 | 14.19 |
Protein Annotations
| Gene3D:1.10.150.50 | EntrezGene:100257847 | wikigene:100257847 | MapMan:35.2 | EMBL:AM427749 | ProteinID:CAN69081 |
| ProteinID:CAN69081.1 | ProteinID:CCB59685 | ProteinID:CCB59685.1 | UniProt:F6HXM8 | EMBL:FN596494 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001660 | EntrezGene:LOC100257847 | wikigene:LOC100257847 | PFAM:PF07647 |
| PANTHER:PTHR33915 | PANTHER:PTHR33915:SF1 | InterPro:SAM | InterPro:SAM/pointed_sf | SUPFAM:SSF47769 | SignalP:SignalP-noTM |
| UniParc:UPI0002109FD6 | ArrayExpress:VIT_09s0002g08420 | EnsemblPlantsGene:VIT_09s0002g08420 | EnsemblPlants:VIT_09s0002g08420.t01 | unigene:Vvi.16076 | RefSeq:XP_002270686 |
| RefSeq:XP_002270686.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:9422914..9423829
Molecular Weight (calculated)
27026.9 Da
IEP (calculated)
9.848
GRAVY (calculated)
-0.336
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPAISPPSL FLLLYRLLYI YMFCNSIKHK GPIPLTAMDW FSWLSKTGLE PSLVYEYALA FSQNELEEED ISYFNHEFLQ SMGISIAKHR LEILKLARKE
101: RGASPRAMSR LIIAIKRTKR CLAKYIRTWV HREESALVVV PRPGYGSRWR GAMLKRNKRM VMATQGRLML TNGSPKVVSK RRIDSFSSPA VYNLPSEEKI
201: DGNGDGDGDG VDDGYWSTVV EEIRWDTMFQ DMKPT
101: RGASPRAMSR LIIAIKRTKR CLAKYIRTWV HREESALVVV PRPGYGSRWR GAMLKRNKRM VMATQGRLML TNGSPKVVSK RRIDSFSSPA VYNLPSEEKI
201: DGNGDGDGDG VDDGYWSTVV EEIRWDTMFQ DMKPT
001: MEDWWFSWLS RTNLEPSLIH EYGLSFSQNE LEHEDISYFD HEFLQSMGIS IAKHRLEILK LARRDRKNSP PLTSRSISRV VTAIKKTRKC LSDHVRAWIR
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT
Arabidopsis Description
At1g15760 [Source:UniProtKB/TrEMBL;Acc:Q9LMQ8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.