Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P26950_001 | Banana | cytosol | 25.5 | 41.56 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 26.69 | 38.07 |
| PGSC0003DMT400078859 | Potato | cytosol | 37.85 | 37.55 |
| Solyc07g007350.1.1 | Tomato | cytosol | 37.45 | 36.86 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 27.49 | 36.32 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 27.09 | 35.98 |
| VIT_09s0002g08420.t01 | Wine grape | golgi, plasma membrane | 33.47 | 35.74 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 24.7 | 35.23 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 25.9 | 33.85 |
| KRH12842 | Soybean | cytosol, nucleus, plastid | 37.05 | 32.75 |
| KRH37823 | Soybean | nucleus | 37.05 | 31.74 |
| EES11537 | Sorghum | cytosol | 23.11 | 31.18 |
| KRH20227 | Soybean | cytosol | 36.26 | 30.85 |
| KRH03583 | Soybean | nucleus | 36.65 | 28.93 |
| EER90109 | Sorghum | nucleus | 23.9 | 27.03 |
| Zm00001d036740_P001 | Maize | cytosol | 21.12 | 26.37 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 21.51 | 26.34 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 21.51 | 26.09 |
| Zm00001d046580_P001 | Maize | cytosol | 21.51 | 25.59 |
| Os04t0644100-01 | Rice | cytosol | 19.12 | 25.53 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 20.72 | 25.12 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 21.51 | 24.88 |
| Zm00001d002096_P001 | Maize | cytosol | 20.32 | 24.88 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 11.16 | 24.78 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 20.32 | 24.52 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 19.12 | 24.12 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 21.91 | 24.02 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 22.71 | 23.95 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 20.72 | 23.85 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 19.92 | 23.81 |
| Bra013153.1-P | Field mustard | cytosol | 23.11 | 23.39 |
| AT2G12462.1 | Thale cress | cytosol | 23.11 | 23.29 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 21.12 | 23.04 |
| CDY50403 | Canola | cytosol | 22.71 | 22.98 |
| CDX93107 | Canola | cytosol | 22.71 | 22.98 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 19.92 | 21.55 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 19.92 | 21.46 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 20.32 | 20.99 |
| OQU75953 | Sorghum | cytosol | 21.12 | 20.08 |
| Zm00001d045137_P001 | Maize | plastid | 11.95 | 17.54 |
| OQU80824 | Sorghum | plastid | 13.55 | 16.75 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 15.14 | 12.54 |
Protein Annotations
| ArrayExpress:VIT_11s0118g00550 | EMBL:FN595515 | EnsemblPlants:VIT_11s0118g00550.t01 | EnsemblPlantsGene:VIT_11s0118g00550 | Gene3D:1.10.150.50 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001660 | InterPro:SAM | InterPro:SAM/pointed_sf | PANTHER:PTHR33915 |
| PANTHER:PTHR33915:SF3 | PFAM:PF07647 | ProteinID:CBI25572 | ProteinID:CBI25572.3 | SUPFAM:SSF47769 | UniParc:UPI0001BE24CF |
| UniProt:D7T4Z0 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:6332000..6333254
Molecular Weight (calculated)
28115.5 Da
IEP (calculated)
10.488
GRAVY (calculated)
-0.676
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWFSWLSKT DLEPSLTYEY GLAFARNELQ EEDVVHFNHE FLQSMGISVA KHRLEILKLA KKESGERHNT LSGLLQVISK AKRSFAKCVT KLAFHGDSAR
101: SPLPISTSCQ GSWRGVLLSR PLDATSRSPR LSGPLDRRVH DRSRFTNRSP NLSGPLDGRA QERMPSIANR SPIVSRAVDG RAQEILRTPY RGRSVSGPQD
201: GRMPEGNRPN RSPRLSGPLE GRAMGLDKEK IEGVDGYDSI WATMFQDMKP T
101: SPLPISTSCQ GSWRGVLLSR PLDATSRSPR LSGPLDRRVH DRSRFTNRSP NLSGPLDGRA QERMPSIANR SPIVSRAVDG RAQEILRTPY RGRSVSGPQD
201: GRMPEGNRPN RSPRLSGPLE GRAMGLDKEK IEGVDGYDSI WATMFQDMKP T
001: MDWFSWLSKT DLDPTLSYEY GLIFAQKKLQ GEDIALFNHN FLRRLGVTVT KHRVEILKLS KRETQALSSY NHRPVSAKLI SVVIKATKSV GNRLNKWLSL
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
Arabidopsis Description
Sterile alpha motif (SAM) domain protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.