CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20227	Soybean	cytosol	81.13	87.46
GSMUA_Achr9P26950_001	Banana	cytosol	18.55	38.31
GSMUA_Achr4P09380_001	Banana	cytosol	22.01	37.04
KRH37823	Soybean	nucleus	33.96	36.86
VIT_11s0118g00550.t01	Wine grape	cytosol	28.93	36.65
KRH12842	Soybean	cytosol, nucleus, plastid	32.7	36.62
KRH09696	Soybean	cytosol	22.33	36.22
KRH23610	Soybean	cytosol	21.07	34.9
GSMUA_Achr8P25150_001	Banana	cytosol	20.75	34.74
KRH47406	Soybean	cytosol	22.01	34.48
PGSC0003DMT400078859	Potato	cytosol	27.36	34.39
GSMUA_Achr1P09970_001	Banana	cytosol	20.75	34.38
Solyc07g007350.1.1	Tomato	cytosol	27.36	34.12
GSMUA_Achr8P14710_001	Banana	cytosol	18.87	34.09
GSMUA_Achr8P17040_001	Banana	cytosol	18.87	34.09
KRH44503	Soybean	cytosol	21.7	31.8
EES11537	Sorghum	cytosol	16.98	29.03
HORVU2Hr1G114860.1	Barley	mitochondrion	9.43	26.55
EER90109	Sorghum	nucleus	18.24	26.13
Os04t0644100-01	Rice	cytosol	15.09	25.53
Zm00001d046580_P001	Maize	cytosol	16.35	24.64
Zm00001d036740_P001	Maize	cytosol	15.41	24.38
TraesCS2D01G520300.1	Wheat	cytosol	15.72	24.04
HORVU7Hr1G049610.2	Barley	cytosol, extracellular, plastid	15.41	23.9
Zm00001d002096_P001	Maize	cytosol	15.41	23.9
HORVU7Hr1G115240.1	Barley	cytosol, extracellular, mitochondrion	15.41	23.67
TraesCS7B01G432100.1	Wheat	cytosol	15.09	23.19
TraesCS2B01G547200.1	Wheat	cytosol	14.47	23.12
TraesCS2A01G518900.1	Wheat	cytosol	15.09	22.86
Os06t0645500-01	Rice	cytosol, nucleus, peroxisome	16.98	22.69
TraesCS7D01G506000.1	Wheat	cytosol, extracellular, mitochondrion	15.09	22.12
TraesCS7A01G515500.1	Wheat	cytosol, extracellular, mitochondrion	15.09	22.02
Bra013153.1-P	Field mustard	cytosol	16.98	21.77
CDY50403	Canola	cytosol	16.98	21.77
CDX93107	Canola	cytosol	16.98	21.77
TraesCS7B01G044000.1	Wheat	cytosol	15.41	21.4
AT2G12462.1	Thale cress	cytosol	16.67	21.29
TraesCS7D01G143100.1	Wheat	cytosol	15.09	20.69
TraesCS7A01G141900.1	Wheat	cytosol	14.78	20.43
HORVU7Hr1G029260.1	Barley	cytosol	14.47	19.74
Zm00001d037494_P001	Maize	cytosol, extracellular, plastid	14.78	19.34
OQU75953	Sorghum	cytosol	15.09	18.18
OQU80824	Sorghum	plastid	11.32	17.73
Zm00001d045137_P001	Maize	plastid	7.55	14.04
Os06t0179100-00	Rice	cytosol, nucleus	10.69	11.22

Protein Annotations

EMBL:ACUP02010354	EnsemblPlants:KRH03583	EnsemblPlantsGene:GLYMA_17G106900	EntrezGene:100775936	Gene3D:1.10.150.50	InterPro:SAM/pointed_sf
PANTHER:PTHR33915	PANTHER:PTHR33915:SF3	ProteinID:KRH03583	ProteinID:KRH03583.1	SEG:seg	SUPFAM:SSF47769
UniParc:UPI00023D5467	UniProt:I1MU11	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:8398625..8399832

Molecular Weight (calculated)

35945.3 Da

IEP (calculated)

9.899

GRAVY (calculated)

-0.638

Length

318 amino acids

Sequence
(BLAST)

001: MTTSNLSISY HIGTTPSSSS SSMDWFSWLS RTTLEPSLIY DYGLTFARNE LQLEDACYFN HEFLQSMGIS IAKHRLEILK LVKKQEGGGA ARPNKKLSGV
101: IKKCLRKCMN KFVVSHDHHA VKHMPCSMVN VSVPPPLPPP PHEISWYHQG KLKGSLVRKQ QQGSEELKEE KKEKPFPVPP IYRSRTIALS GPLEYGGRMH
201: HEKMVHSRAL KLSGPLDGRM HERMMMMNST NSRTPLMPGP LDARFVATTK SPRVSGPLDP RVLVENRSPR LPRPSDAARA ETESPMGYSP YNKPKADFDF
301: DDDDHTLWPS LFQDLKPT

Best Arabidopsis Sequence Match ( AT2G12462.1 )
(BLAST)

001: MDWFSWLSKT DLDPTLSYEY GLIFAQKKLQ GEDIALFNHN FLRRLGVTVT KHRVEILKLS KRETQALSSY NHRPVSAKLI SVVIKATKSV GNRLNKWLSL
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT

Arabidopsis Description

Sterile alpha motif (SAM) domain protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.