CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23610	Soybean	cytosol	83.67	85.42
KRH47406	Soybean	cytosol	65.82	63.55
KRH44503	Soybean	cytosol	61.73	55.76
Solyc03g117340.1.1	Tomato	cytosol	51.02	55.25
PGSC0003DMT400084778	Potato	nucleus	52.55	55.08
PGSC0003DMT400073435	Potato	cytosol	52.55	53.93
Solyc06g068310.1.1	Tomato	cytosol	53.06	53.89
GSMUA_Achr9P26950_001	Banana	cytosol	41.33	52.6
VIT_09s0002g08420.t01	Wine grape	golgi, plasma membrane	62.24	51.91
GSMUA_Achr8P14710_001	Banana	cytosol	40.31	44.89
GSMUA_Achr1P09970_001	Banana	cytosol	43.88	44.79
GSMUA_Achr8P17040_001	Banana	cytosol	38.78	43.18
GSMUA_Achr4P09380_001	Banana	cytosol	41.33	42.86
GSMUA_Achr8P25150_001	Banana	cytosol	41.33	42.63
EES11537	Sorghum	cytosol	30.61	32.26
Os04t0644100-01	Rice	cytosol	29.08	30.32
Zm00001d002096_P001	Maize	cytosol	30.61	29.27
HORVU7Hr1G049610.2	Barley	cytosol, extracellular, plastid	29.08	27.8
TraesCS7B01G432100.1	Wheat	cytosol	29.08	27.54
HORVU7Hr1G115240.1	Barley	cytosol, extracellular, mitochondrion	29.08	27.54
Zm00001d046580_P001	Maize	cytosol	29.59	27.49
TraesCS7D01G506000.1	Wheat	cytosol, extracellular, mitochondrion	30.1	27.19
Zm00001d036740_P001	Maize	cytosol	27.55	26.87
HORVU2Hr1G114860.1	Barley	mitochondrion	15.31	26.55
TraesCS2B01G547200.1	Wheat	cytosol	26.53	26.13
EER90109	Sorghum	nucleus	29.59	26.13
Os06t0645500-01	Rice	cytosol, nucleus, peroxisome	31.63	26.05
TraesCS2D01G520300.1	Wheat	cytosol	27.55	25.96
TraesCS2A01G518900.1	Wheat	cytosol	27.55	25.71
KRH12842	Soybean	cytosol, nucleus, plastid	37.24	25.7
TraesCS7A01G515500.1	Wheat	cytosol, extracellular, mitochondrion	28.57	25.69
KRH37823	Soybean	nucleus	36.73	24.57
KRH20227	Soybean	cytosol	36.22	24.07
KRH03583	Soybean	nucleus	36.22	22.33
TraesCS7B01G044000.1	Wheat	cytosol	26.02	22.27
Zm00001d037494_P001	Maize	cytosol, extracellular, plastid	27.04	21.81
TraesCS7D01G143100.1	Wheat	cytosol	25.51	21.55
HORVU7Hr1G029260.1	Barley	cytosol	25.51	21.46
TraesCS7A01G141900.1	Wheat	cytosol	25.0	21.3
OQU75953	Sorghum	cytosol	26.53	19.7
Zm00001d045137_P001	Maize	plastid	15.82	18.13
OQU80824	Sorghum	plastid	15.31	14.78
Os06t0179100-00	Rice	cytosol, nucleus	18.88	12.21

Protein Annotations

EMBL:ACUP02009106	EnsemblPlants:KRH09696	EnsemblPlantsGene:GLYMA_15G005800	EntrezGene:100796261	Gene3D:1.10.150.50	InterPro:SAM/pointed_sf
PANTHER:PTHR33915	PANTHER:PTHR33915:SF1	ProteinID:KRH09696	ProteinID:KRH09696.1	SEG:seg	SUPFAM:SSF47769
UniParc:UPI000233B2C7	UniProt:I1MCD4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:498585..501089

Molecular Weight (calculated)

22203.5 Da

IEP (calculated)

9.510

GRAVY (calculated)

-0.519

Length

196 amino acids

Sequence
(BLAST)

001: MDWFSWLSKS GLEPSLVYEY GLTFAHNELE EEDMFYFNHE FLQSMGISIA KHRLEILKLA RKEKGKSPRA VARLAVAIKR TKNTFASYVR TLMHKEESSS
101: SNSALVVVPV PPSRPSSSGL GKRWKSAMMK RGKKQETLFL TNGSSTVVPA QPGFSSPVVY HFQKDEKMGG DDDDGYWSAA VEEIKWDTMF QDLKPN

Best Arabidopsis Sequence Match ( AT1G15760.1 )
(BLAST)

001: MEDWWFSWLS RTNLEPSLIH EYGLSFSQNE LEHEDISYFD HEFLQSMGIS IAKHRLEILK LARRDRKNSP PLTSRSISRV VTAIKKTRKC LSDHVRAWIR
101: REEESASSRA LVLVPKKTSN GIGKWRGGFL KRNKRSVMPS NGNGGLEKQE RLLLTNGTPC RIDSFSSPMV FDYSFKDEKL YAQDTYFEDI KWDSMFQNLK
201: PT

Arabidopsis Description

At1g15760 [Source:UniProtKB/TrEMBL;Acc:Q9LMQ8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.