Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH12842 | Soybean | cytosol, nucleus, plastid | 80.2 | 82.75 |
| PGSC0003DMT400078859 | Potato | cytosol | 33.11 | 38.34 |
| VIT_11s0118g00550.t01 | Wine grape | cytosol | 31.74 | 37.05 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 19.45 | 37.01 |
| Solyc07g007350.1.1 | Tomato | cytosol | 32.08 | 36.86 |
| KRH09696 | Soybean | cytosol | 24.57 | 36.73 |
| KRH23610 | Soybean | cytosol | 23.55 | 35.94 |
| KRH20227 | Soybean | cytosol | 35.84 | 35.59 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 22.18 | 34.21 |
| KRH03583 | Soybean | nucleus | 36.86 | 33.96 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 21.84 | 33.86 |
| KRH47406 | Soybean | cytosol | 22.87 | 33.0 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 19.11 | 31.82 |
| KRH44503 | Soybean | cytosol | 23.21 | 31.34 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 20.14 | 30.73 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 18.09 | 30.11 |
| EES11537 | Sorghum | cytosol | 17.41 | 27.42 |
| EER90109 | Sorghum | nucleus | 19.8 | 26.13 |
| Os04t0644100-01 | Rice | cytosol | 16.72 | 26.06 |
| AT2G12462.1 | Thale cress | cytosol | 21.5 | 25.3 |
| Zm00001d036740_P001 | Maize | cytosol | 17.06 | 24.88 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 9.56 | 24.78 |
| Zm00001d002096_P001 | Maize | cytosol | 17.06 | 24.39 |
| Bra013153.1-P | Field mustard | cytosol | 20.48 | 24.19 |
| Zm00001d046580_P001 | Maize | cytosol | 17.41 | 24.17 |
| CDY50403 | Canola | cytosol | 20.14 | 23.79 |
| CDX93107 | Canola | cytosol | 19.8 | 23.39 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 15.7 | 22.12 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 15.02 | 22.11 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 15.7 | 21.9 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 15.36 | 21.74 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 15.02 | 21.46 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 17.06 | 21.01 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 14.68 | 20.77 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 15.36 | 20.74 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 16.04 | 20.52 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 16.04 | 20.43 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 15.7 | 19.83 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 15.7 | 19.74 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 14.68 | 19.72 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 16.04 | 19.34 |
| OQU75953 | Sorghum | cytosol | 17.41 | 19.32 |
| Zm00001d045137_P001 | Maize | plastid | 9.22 | 15.79 |
| OQU80824 | Sorghum | plastid | 10.92 | 15.76 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 12.97 | 12.54 |
Protein Annotations
| EMBL:ACUP02005517 | EnsemblPlants:KRH37823 | EnsemblPlantsGene:GLYMA_09G091800 | EntrezGene:100793487 | Gene3D:1.10.150.50 | InterPro:SAM/pointed_sf |
| PANTHER:PTHR33915 | PANTHER:PTHR33915:SF3 | ProteinID:KRH37823 | ProteinID:KRH37823.1 | SEG:seg | SUPFAM:SSF47769 |
| UniParc:UPI0002337FEF | UniProt:I1L287 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:12406469..12408045
Molecular Weight (calculated)
33122.5 Da
IEP (calculated)
10.041
GRAVY (calculated)
-0.747
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWFSWLSRT SLEPSLIYEY GLAFARNELQ LEDAIYFNHE FLQSMGVSIA KHRLEIIKLA KKEVGGGGAV MMMRSSSSIK FSIKKCLRKC FSKLVSREDH
101: HEAMMATTAM MATEPNWYQG KWRRARHNGN NEDLKGDNNN NNNNNNKGVQ RSRTIALSGP LDGNGRIIHE KMMNNNKVMK LSGPLDGKMN GGNNERVNMY
201: ASANRSPLMS ANTPTRPLDG RFMGSVKSPR LSGPLDARPT MVNSRSPRLT RPLDDRTESP MGYSPYNKVR ADAADYDDDY AMWPTLFEDL KPT
101: HEAMMATTAM MATEPNWYQG KWRRARHNGN NEDLKGDNNN NNNNNNKGVQ RSRTIALSGP LDGNGRIIHE KMMNNNKVMK LSGPLDGKMN GGNNERVNMY
201: ASANRSPLMS ANTPTRPLDG RFMGSVKSPR LSGPLDARPT MVNSRSPRLT RPLDDRTESP MGYSPYNKVR ADAADYDDDY AMWPTLFEDL KPT
001: MDWFSWLSKT DLDPTLSYEY GLIFAQKKLQ GEDIALFNHN FLRRLGVTVT KHRVEILKLS KRETQALSSY NHRPVSAKLI SVVIKATKSV GNRLNKWLSL
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
Arabidopsis Description
Sterile alpha motif (SAM) domain protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.