Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH03583 | Soybean | nucleus | 87.46 | 81.13 |
| KRH12842 | Soybean | cytosol, nucleus, plastid | 36.61 | 38.03 |
| GSMUA_Achr9P26950_001 | Banana | cytosol | 19.66 | 37.66 |
| GSMUA_Achr4P09380_001 | Banana | cytosol | 23.73 | 37.04 |
| VIT_11s0118g00550.t01 | Wine grape | cytosol | 30.85 | 36.26 |
| KRH09696 | Soybean | cytosol | 24.07 | 36.22 |
| KRH23610 | Soybean | cytosol | 23.39 | 35.94 |
| KRH37823 | Soybean | nucleus | 35.59 | 35.84 |
| GSMUA_Achr8P25150_001 | Banana | cytosol | 23.05 | 35.79 |
| Solyc07g007350.1.1 | Tomato | cytosol | 30.85 | 35.69 |
| PGSC0003DMT400078859 | Potato | cytosol | 30.51 | 35.57 |
| GSMUA_Achr8P17040_001 | Banana | cytosol | 20.68 | 34.66 |
| KRH47406 | Soybean | cytosol | 23.73 | 34.48 |
| GSMUA_Achr1P09970_001 | Banana | cytosol | 22.37 | 34.38 |
| GSMUA_Achr8P14710_001 | Banana | cytosol | 20.0 | 33.52 |
| KRH44503 | Soybean | cytosol | 23.73 | 32.26 |
| EES11537 | Sorghum | cytosol | 17.97 | 28.49 |
| EER90109 | Sorghum | nucleus | 19.32 | 25.68 |
| Os04t0644100-01 | Rice | cytosol | 16.27 | 25.53 |
| Zm00001d036740_P001 | Maize | cytosol | 16.95 | 24.88 |
| HORVU2Hr1G114860.1 | Barley | mitochondrion | 9.49 | 24.78 |
| Zm00001d046580_P001 | Maize | cytosol | 17.63 | 24.64 |
| HORVU7Hr1G049610.2 | Barley | cytosol, extracellular, plastid | 16.95 | 24.39 |
| HORVU7Hr1G115240.1 | Barley | cytosol, extracellular, mitochondrion | 16.61 | 23.67 |
| Zm00001d002096_P001 | Maize | cytosol | 16.27 | 23.41 |
| TraesCS7B01G432100.1 | Wheat | cytosol | 16.27 | 23.19 |
| TraesCS2B01G547200.1 | Wheat | cytosol | 15.59 | 23.12 |
| TraesCS2D01G520300.1 | Wheat | cytosol | 16.27 | 23.08 |
| TraesCS7D01G506000.1 | Wheat | cytosol, extracellular, mitochondrion | 16.61 | 22.58 |
| TraesCS2A01G518900.1 | Wheat | cytosol | 15.93 | 22.38 |
| CDX93107 | Canola | cytosol | 18.64 | 22.18 |
| CDY50403 | Canola | cytosol | 18.64 | 22.18 |
| Bra013153.1-P | Field mustard | cytosol | 18.64 | 22.18 |
| TraesCS7A01G515500.1 | Wheat | cytosol, extracellular, mitochondrion | 16.27 | 22.02 |
| Os06t0645500-01 | Rice | cytosol, nucleus, peroxisome | 17.63 | 21.85 |
| AT2G12462.1 | Thale cress | cytosol | 18.31 | 21.69 |
| TraesCS7D01G143100.1 | Wheat | cytosol | 16.61 | 21.12 |
| TraesCS7B01G044000.1 | Wheat | cytosol | 16.27 | 20.96 |
| HORVU7Hr1G029260.1 | Barley | cytosol | 15.93 | 20.17 |
| TraesCS7A01G141900.1 | Wheat | cytosol | 15.59 | 20.0 |
| Zm00001d037494_P001 | Maize | cytosol, extracellular, plastid | 16.27 | 19.75 |
| OQU75953 | Sorghum | cytosol | 17.29 | 19.32 |
| OQU80824 | Sorghum | plastid | 11.86 | 17.24 |
| Zm00001d045137_P001 | Maize | plastid | 8.47 | 14.62 |
| Os06t0179100-00 | Rice | cytosol, nucleus | 11.86 | 11.55 |
Protein Annotations
| EMBL:ACUP02008248 | EnsemblPlants:KRH20227 | EnsemblPlantsGene:GLYMA_13G164000 | EntrezGene:100780479 | Gene3D:1.10.150.50 | InterPro:SAM/pointed_sf |
| PANTHER:PTHR33915 | PANTHER:PTHR33915:SF3 | ProteinID:KRH20227 | ProteinID:KRH20227.1 | SEG:seg | SUPFAM:SSF47769 |
| UniParc:UPI000233B3A2 | UniProt:I1LZV2 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:27911603..27912972
Molecular Weight (calculated)
33884.9 Da
IEP (calculated)
10.207
GRAVY (calculated)
-0.792
Length
295 amino acids
Sequence
(BLAST)
(BLAST)
001: MDWFSWLSRT TLEPSLIYDY GLTFARNELQ LEDARYFNHE FLQSMGISIA KHRLEILKLV KKQEGGATAR PNKKLSGVIK KCLRKCMNKF VSREDHHHHH
101: AVKHVPCSMV PVSVPPPPPP PEISWYHQGK LKGSLVRKQQ GSEELKEEEK EKPLPVPPMY RSRTIALSGP LEYGSRMHHE KMAQNRALKL SGPLDGRMHE
201: RMMMNSTNSR SPLMPRPLDA RFVATTRSPR VSGPLDPRVM VENRSPRLTR PSNATRAETQ SPMGYSPYNK PKADFDFDDD DHTLWPSLFQ DLKPT
101: AVKHVPCSMV PVSVPPPPPP PEISWYHQGK LKGSLVRKQQ GSEELKEEEK EKPLPVPPMY RSRTIALSGP LEYGSRMHHE KMAQNRALKL SGPLDGRMHE
201: RMMMNSTNSR SPLMPRPLDA RFVATTRSPR VSGPLDPRVM VENRSPRLTR PSNATRAETQ SPMGYSPYNK PKADFDFDDD DHTLWPSLFQ DLKPT
001: MDWFSWLSKT DLDPTLSYEY GLIFAQKKLQ GEDIALFNHN FLRRLGVTVT KHRVEILKLS KRETQALSSY NHRPVSAKLI SVVIKATKSV GNRLNKWLSL
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT
Arabidopsis Description
Sterile alpha motif (SAM) domain protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.