CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37823	Soybean	nucleus	82.75	80.2
GSMUA_Achr9P26950_001	Banana	cytosol	20.77	38.31
PGSC0003DMT400078859	Potato	cytosol	33.8	37.94
KRH09696	Soybean	cytosol	25.7	37.24
VIT_11s0118g00550.t01	Wine grape	cytosol	32.75	37.05
KRH20227	Soybean	cytosol	38.03	36.61
Solyc07g007350.1.1	Tomato	cytosol	32.75	36.47
KRH23610	Soybean	cytosol	24.3	35.94
GSMUA_Achr4P09380_001	Banana	cytosol	22.89	34.39
GSMUA_Achr8P25150_001	Banana	cytosol	22.89	34.21
GSMUA_Achr8P17040_001	Banana	cytosol	21.13	34.09
KRH47406	Soybean	cytosol	23.94	33.5
KRH03583	Soybean	nucleus	36.62	32.7
GSMUA_Achr8P14710_001	Banana	cytosol	19.72	31.82
GSMUA_Achr1P09970_001	Banana	cytosol	21.48	31.77
KRH44503	Soybean	cytosol	23.94	31.34
EES11537	Sorghum	cytosol	18.31	27.96
Os04t0644100-01	Rice	cytosol	17.25	26.06
EER90109	Sorghum	nucleus	20.07	25.68
AT2G12462.1	Thale cress	cytosol	22.18	25.3
Zm00001d002096_P001	Maize	cytosol	17.96	24.88
Zm00001d036740_P001	Maize	cytosol	17.61	24.88
HORVU2Hr1G114860.1	Barley	mitochondrion	9.86	24.78
Zm00001d046580_P001	Maize	cytosol	18.31	24.64
Bra013153.1-P	Field mustard	cytosol	21.13	24.19
CDX93107	Canola	cytosol	20.77	23.79
CDY50403	Canola	cytosol	20.77	23.79
HORVU7Hr1G115240.1	Barley	cytosol, extracellular, mitochondrion	16.9	23.19
TraesCS2B01G547200.1	Wheat	cytosol	15.85	22.61
TraesCS2D01G520300.1	Wheat	cytosol	16.55	22.6
HORVU7Hr1G049610.2	Barley	cytosol, extracellular, plastid	16.2	22.44
TraesCS2A01G518900.1	Wheat	cytosol	16.55	22.38
TraesCS7B01G432100.1	Wheat	cytosol	16.2	22.22
TraesCS7D01G506000.1	Wheat	cytosol, extracellular, mitochondrion	16.55	21.66
TraesCS7A01G515500.1	Wheat	cytosol, extracellular, mitochondrion	15.85	20.64
Os06t0645500-01	Rice	cytosol, nucleus, peroxisome	17.25	20.59
TraesCS7D01G143100.1	Wheat	cytosol	16.55	20.26
HORVU7Hr1G029260.1	Barley	cytosol	16.55	20.17
TraesCS7B01G044000.1	Wheat	cytosol	16.2	20.09
TraesCS7A01G141900.1	Wheat	cytosol	16.2	20.0
OQU75953	Sorghum	cytosol	17.61	18.94
Zm00001d037494_P001	Maize	cytosol, extracellular, plastid	16.2	18.93
OQU80824	Sorghum	plastid	11.97	16.75
Zm00001d045137_P001	Maize	plastid	9.15	15.2
Os06t0179100-00	Rice	cytosol, nucleus	13.38	12.54

Protein Annotations

EMBL:ACUP02009411	EnsemblPlants:KRH12842	EnsemblPlantsGene:GLYMA_15G198500	EntrezGene:100805121	Gene3D:1.10.150.50	InterPro:SAM/pointed_sf
PANTHER:PTHR33915	PANTHER:PTHR33915:SF3	ProteinID:KRH12842	ProteinID:KRH12842.1	SEG:seg	SUPFAM:SSF47769
UniParc:UPI000233B2EC	UniProt:I1MHX5	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:23411462..23412766

Molecular Weight (calculated)

32273.5 Da

IEP (calculated)

9.935

GRAVY (calculated)

-0.754

Length

284 amino acids

Sequence
(BLAST)

001: MDWFSWLSRT SLEPSLIYEY GLAFARNELQ LEDAIYFNHE FLQSMGVSIA KHRLEILKLA KKEDGGVVVR SSIKFSIKKC LRKCFSKLVS REDHHEAMIM
101: LKDMPPEPNW YQGKWRRARH NGNNEELKGE NNNNNNKGVQ RNRTIALSGP LDGNGRIIHE KMVNNNKVMK LSGPLDGKMN GGNNERVNVY ANANRSPLMG
201: ATTPTRALDG RFMGSTKSPR LSGPLDARPT MVNSRSPRLP RPLDDRADSP MGYSPYNIKV RADAADYDDD YAMWPTLFED LKPT

Best Arabidopsis Sequence Match ( AT2G12462.1 )
(BLAST)

001: MDWFSWLSKT DLDPTLSYEY GLIFAQKKLQ GEDIALFNHN FLRRLGVTVT KHRVEILKLS KRETQALSSY NHRPVSAKLI SVVIKATKSV GNRLNKWLSL
101: GGTAVVEPLK EKQSPPPAYR TGAFLTGNNN KVNAEKAVVQ VERLPVIKRK RIVKSGPLDR NHGIQEKMTL VSNRSMNLSG PLDRSVQERL ILAYRSPIVS
201: GQLDGNLNER LRLSGPLKGR PPSPSVYVEY NKRDDDTRWD AMFHNLKPT

Arabidopsis Description

Sterile alpha motif (SAM) domain protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.