Factsheet for TraesCS2B01G225100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G340600.1
TraesCS1D01G342600.1
TraesCS2A01G346700.1
TraesCS2A01G368500.1
TraesCS2B01G365000.1
TraesCS2B01G385700.2
TraesCS2D01G345400.1
TraesCS2D01G365300.2
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14950.1	TraesCS2A01G346700.1	AT1G27300.1	21798944
AT4G14950.1	TraesCS2B01G365000.1	AT1G27300.1	21798944
AT4G14950.1	TraesCS2D01G345400.1	AT1G27300.1	21798944
AT4G14950.1	TraesCS1A01G340600.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS1D01G342600.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS3A01G274800.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS3A01G313000.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS3B01G158900.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS3B01G308400.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS3D01G141300.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS3D01G274500.1	AT3G16310.1	21798944
AT4G14950.1	TraesCS2A01G368500.1	AT3G60600.1	21798944
AT4G14950.1	TraesCS2B01G385700.2	AT3G60600.1	21798944
AT4G14950.1	TraesCS2D01G365300.2	AT3G60600.1	21798944
AT4G14950.1	TraesCS6A01G237600.1	AT3G60600.1	21798944
AT4G14950.1	TraesCS6B01G266100.1	AT3G60600.1	21798944
AT4G14950.1	TraesCS6D01G220300.1	AT3G60600.1	21798944
AT4G14950.1	TraesCS7A01G300700.1	AT3G60600.1	21798944
AT4G14950.1	TraesCS7D01G296400.1	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G205700.1	Wheat	plasma membrane	98.35	98.35
TraesCS2A01G197700.1	Wheat	plasma membrane	96.46	96.24
Os07t0571500-00	Rice	plasma membrane	80.19	79.63
EER99579	Sorghum	plasma membrane	73.58	73.93
HORVU2Hr1G038330.2	Barley	cytosol, plasma membrane, plastid	92.45	73.27
Zm00001d021861_P001	Maize	cytosol, peroxisome, plasma membrane	70.99	72.71
Zm00001d016727_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	27.12	68.45
Zm00001d040150_P001	Maize	endoplasmic reticulum, plasma membrane	26.65	65.7
Bra039706.1-P	Field mustard	plasma membrane	49.76	59.94
CDY22723	Canola	plasma membrane	49.76	59.94
GSMUA_Achr3P29660_001	Banana	plasma membrane	58.73	58.31
GSMUA_AchrUn_...	Banana	plasma membrane	51.89	57.29
AT1G05360.1	Thale cress	plasma membrane	56.13	57.21
CDY10028	Canola	endoplasmic reticulum, plasma membrane, vacuole	55.66	56.59
CDY59789	Canola	mitochondrion, plasma membrane, plastid, vacuole	55.66	56.46
Bra032466.1-P	Field mustard	mitochondrion, plasma membrane, plastid, vacuole	55.66	56.46
KRH27628	Soybean	cytosol, nucleus, plasma membrane	55.19	56.39
AT4G14950.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	54.95	56.01
TraesCS3B01G347500.1	Wheat	plasma membrane	57.08	55.89
KRH77865	Soybean	golgi, plastid, vacuole	55.66	55.53
CDY09041	Canola	plasma membrane	55.66	54.88
CDY54866	Canola	plasma membrane, plastid	53.54	53.66
Bra036917.1-P	Field mustard	plasma membrane	48.11	53.12
VIT_05s0020g03160.t01	Wine grape	plasma membrane	54.95	53.08
Solyc09g075850.2.1	Tomato	golgi, peroxisome, plasma membrane	52.83	52.83
PGSC0003DMT400081427	Potato	golgi, peroxisome, plasma membrane	52.12	52.12
Solyc01g099140.2.1	Tomato	peroxisome	52.12	52.12
PGSC0003DMT400063650	Potato	cytosol, nucleus, peroxisome	52.12	52.12
GSMUA_Achr6P25070_001	Banana	cytosol, peroxisome, plasma membrane	47.64	50.5
CDY50267	Canola	plastid	42.45	49.86
CDX93269	Canola	mitochondrion	10.14	48.31
GSMUA_Achr6P25060_001	Banana	extracellular	17.69	37.88

Protein Annotations

EnsemblPlants:TraesCS2B01G225100.1	EnsemblPlantsGene:TraesCS2B01G225100	InterPro:SNARE_assoc	PANTHER:PTHR10281	PANTHER:PTHR10281:SF48	PFAM:PF09335
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2B:+:214822422..214828652

Molecular Weight (calculated)

47073.0 Da

IEP (calculated)

8.999

GRAVY (calculated)

0.306

Length

424 amino acids

Sequence
(BLAST)

001: MMEHTAVGED QAMSDLRDKH RLDLESLTLT SQPFKTLALF VLAIGQSIRS TCSCVLKEGS RLKFLVPLLG ATCVLLLVTD GPHEKHMQEL LWYARFGLWW
101: VVLGVASSIG LGSGLHTFVL YLGPHIALFT MKAVQCGRVD LKSAPYDTIL LKRRPSWLEK ECLEFGPPIY QETIPFSKIL HEVHLEAVLW GIGTALGELP
201: PYFISRAASM SGQKVEELAE LDASISKEGF LSSTLRRAKR WLMSHSQYLS FPTILLLASV PNPLFDLAGI LCGQFNVPFW KFFLATLIGK AIIKVYMQTT
301: LVITLCNNQL LELVEERLVW VFSNSPGVSS ILPSLVTKLK TAKDKFLMAS VATSASSAAK GKKWNLSFSL IWNTVVWLMI VNFIIQIITS TAQSYLKKQQ
401: ELEISMKSSA TLSSASEPAA RISN

Best Arabidopsis Sequence Match ( AT1G05360.1 )
(BLAST)

001: MGYGNRASSK TPAISGLREK HQQDLEKLTL TSQPFKTLRL FVVAVFLYVR RWSSYLLANV GWLILFCSIF VAFAALLVTL DGPHVKHVEE LSEYTRFGLW
101: WIFLGVASSI GLGSGLHTFV LYLGPHIALF TIKVMQCGRV DLKSAIYDTI QLKRSPSWLD KPCHEFGSPV FSSGVPLSSI LPQVQIEAIL WGLGTALGEL
201: PPYFISRAAS LSGGKMKELE TCSGDDNGFI AKRVNQIKSW LLSHSQYLNF FTILILASVP NPLFDLAGIM CGQFEKPFWE FFLATLIGKA IIKTHIQTVF
301: IICVCNNQLL DWVENELIYI LSFVPGFASA LPELTAKLRL MKEKYLIASP PVSSDINVKK WDLSFASVWN GVVWLMLLNF FGQIVTSTAQ RYLKKQQEEE
401: LDALTNKSSL TSKKSK

Arabidopsis Description

KMS2Vacuole membrane protein KMS2 [Source:UniProtKB/Swiss-Prot;Acc:F4I8Q7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.