Factsheet for Solyc01g099140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
cytosol 1
peroxisome 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063650	Potato	cytosol, nucleus, peroxisome	96.93	96.93
Solyc09g075850.2.1	Tomato	golgi, peroxisome, plasma membrane	57.55	57.55
Zm00001d016727_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	22.64	57.14
Zm00001d040150_P001	Maize	endoplasmic reticulum, plasma membrane	22.64	55.81
Zm00001d021861_P001	Maize	cytosol, peroxisome, plasma membrane	52.36	53.62
EER99579	Sorghum	plasma membrane	52.83	53.08
TraesCS2B01G225100.1	Wheat	plasma membrane	52.12	52.12
TraesCS2D01G205700.1	Wheat	plasma membrane	52.12	52.12
TraesCS2A01G197700.1	Wheat	plasma membrane	51.89	51.76
Os07t0571500-00	Rice	plasma membrane	52.12	51.76
GSMUA_Achr6P25070_001	Banana	cytosol, peroxisome, plasma membrane	45.05	47.75
HORVU2Hr1G038330.2	Barley	cytosol, plasma membrane, plastid	52.12	41.31

Protein Annotations

MapMan:35.1	ncoils:Coil	GO:GO:0000407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006887	GO:GO:0007029	GO:GO:0007030
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	UniProt:K4B0V1
PANTHER:PTHR10281	PANTHER:PTHR10281:SF44	EnsemblPlantsGene:Solyc01g099140.2	EnsemblPlants:Solyc01g099140.2.1	TMHMM:TMhelix	UniParc:UPI0002768B71
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:89449618..89456802

Molecular Weight (calculated)

46891.5 Da

IEP (calculated)

8.555

GRAVY (calculated)

0.248

Length

424 amino acids

Sequence
(BLAST)

001: MGSVEQEQLL DSPLHVDNSA SAGLLDRHNR ELEHLSLTNQ PLKTVKFFCL AVLKCLHQFS VNTIKCSCLV VILLATAGGS LLFTRGRAYE ETLQPVQELL
101: KYLRFGLWWL VLGVASSIGL GSGLHTFVLY LGPHIALFTI KSVSCGRVDI KSAPYDTIQL RNGPSWLDKD CSEFGPPLFS LPGARVPLTS ILNQIQLEAI
201: LWGIGTALGE LPPYFISRAA SISGREGELM EDLDSASKED TGIISNHLKQ IKKWLISNRQ YLNFFTILVL ASVPNPLFDL AGIMCGQFGI PFWKFFTATL
301: IGKAIIKTHI QTAFIISVCN NQLLDLIENQ LVRVLGLIPG VASFLPNIIS KLHIAREKYM AASAPVSSVK AKKWDLSLGS VWNTVVWLML LNFSAKIVNT
401: TAKGYLREQQ EKELAALENN RARE

Best Arabidopsis Sequence Match ( AT4G14950.3 )
(BLAST)

001: MLRSQATLRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL WWIALGVASS
101: IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT ALGELPPYFI
201: SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII KTHIQTIFII
301: CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH LKKKQEKEMA
401: TLTHSD

Arabidopsis Description

KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.