CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
EES02290
EES05123
EES12559
EES14570
EES19830
KXG31128

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14950.1	EES05123	AT1G27300.1	21798944
AT4G14950.1	EES02290	AT3G16310.1	21798944
AT4G14950.1	EES19830	AT3G16310.1	21798944
AT4G14950.1	EES12559	AT3G60600.1	21798944
AT4G14950.1	EES14570	AT3G60600.1	21798944
AT4G14950.1	KXG31128	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021861_P001	Maize	cytosol, peroxisome, plasma membrane	90.05	91.79
Zm00001d016727_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	31.04	77.98
TraesCS2B01G225100.1	Wheat	plasma membrane	73.93	73.58
TraesCS2D01G205700.1	Wheat	plasma membrane	73.46	73.11
Zm00001d040150_P001	Maize	endoplasmic reticulum, plasma membrane	29.62	72.67
Os07t0571500-00	Rice	plasma membrane	73.46	72.6
TraesCS2A01G197700.1	Wheat	plasma membrane	72.99	72.47
Bra039706.1-P	Field mustard	plasma membrane	48.82	58.52
CDY22723	Canola	plasma membrane	48.82	58.52
HORVU2Hr1G038330.2	Barley	cytosol, plasma membrane, plastid	72.99	57.57
AT1G05360.1	Thale cress	plasma membrane	56.16	56.97
Bra032466.1-P	Field mustard	mitochondrion, plasma membrane, plastid, vacuole	55.92	56.46
CDY59789	Canola	mitochondrion, plasma membrane, plastid, vacuole	55.92	56.46
GSMUA_Achr3P29660_001	Banana	plasma membrane	57.11	56.44
CDY10028	Canola	endoplasmic reticulum, plasma membrane, vacuole	55.69	56.35
KRH27628	Soybean	cytosol, nucleus, plasma membrane	55.21	56.14
KRH77865	Soybean	golgi, plastid, vacuole	56.16	55.76
GSMUA_AchrUn_...	Banana	plasma membrane	50.24	55.21
AT4G14950.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	54.27	55.05
EES08797	Sorghum	mitochondrion	54.98	53.58
KXG33509	Sorghum	mitochondrion	55.21	53.44
CDY09041	Canola	plasma membrane	54.03	53.02
CDY54866	Canola	plasma membrane, plastid	53.08	52.96
VIT_05s0020g03160.t01	Wine grape	plasma membrane	54.98	52.85
Solyc01g099140.2.1	Tomato	peroxisome	53.08	52.83
Bra036917.1-P	Field mustard	plasma membrane	47.87	52.6
PGSC0003DMT400063650	Potato	cytosol, nucleus, peroxisome	52.61	52.36
Solyc09g075850.2.1	Tomato	golgi, peroxisome, plasma membrane	50.47	50.24
PGSC0003DMT400081427	Potato	golgi, peroxisome, plasma membrane	49.76	49.53
CDX93269	Canola	mitochondrion	10.19	48.31
CDY50267	Canola	plastid	41.23	48.2
GSMUA_Achr6P25070_001	Banana	cytosol, peroxisome, plasma membrane	45.26	47.75
GSMUA_Achr6P25060_001	Banana	extracellular	17.3	36.87

Protein Annotations

MapMan:35.1	EntrezGene:8056368	UniProt:C5XC98	EnsemblPlants:EER99579	ProteinID:EER99579	ProteinID:EER99579.1
GO:GO:0000407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0006810	GO:GO:0006887	GO:GO:0007029	GO:GO:0007030	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	PFAM:PF09335	PANTHER:PTHR10281	PANTHER:PTHR10281:SF48
InterPro:SNARE_assoc	EnsemblPlantsGene:SORBI_3002G346400	TMHMM:TMhelix	UniParc:UPI0001A83BA5	RefSeq:XP_002463058.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:71235707..71241516

Molecular Weight (calculated)

46977.0 Da

IEP (calculated)

9.362

GRAVY (calculated)

0.339

Length

422 amino acids

Sequence
(BLAST)

001: MGPTVGAGED KAISELREQH RVDLERLTIT SRPFKTLAFF VLAIAQSLER TCSSVLKKGY RLKIAMPLVA VTWVLLLFTD GLHEKHLQEL LWYVRFGLWW
101: IILGVASSIG LGSGLHTFIM YLGPHVALFT IKAVQCGRVD LKSAPYDTIL LKRSPSWLEK DCLQFGPPIY HETIPFSKIL QEVCLEAVLW GIGTALGELP
201: PYFLSRAASM SGRLIDELED LDASIPEGFL SSTLRQAKRW LMSHSQHLSF TLILLLASVP NPLFDLAGML CGQFNIPFWK FFLATLIGKA IVKVCIQTTL
301: VITLCNNQLL DLVEKRLIWA FSNVPGVASV LPSLVSKLKM AKNKFLSAHV AASASSSVKG KKWTLSFSLV WNTLVWLMVV NFIIQIVTST AQGYLRTQQE
401: QEISKKLETE LSTSEPSSGL PK

Best Arabidopsis Sequence Match ( AT4G14950.1 )
(BLAST)

001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD

Arabidopsis Description

KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [cytosol,endoplasmic reticulum,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.