Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22723 | Canola | plasma membrane | 79.09 | 93.47 |
| Bra039706.1-P | Field mustard | plasma membrane | 78.61 | 92.9 |
| CDY54866 | Canola | plasma membrane, plastid | 88.94 | 87.47 |
| CDY09041 | Canola | plasma membrane | 90.14 | 87.21 |
| Bra036917.1-P | Field mustard | plasma membrane | 78.85 | 85.42 |
| CDY50267 | Canola | plastid | 68.75 | 79.22 |
| KRH27628 | Soybean | cytosol, nucleus, plasma membrane | 70.91 | 71.08 |
| AT1G05360.1 | Thale cress | plasma membrane | 69.71 | 69.71 |
| KRH77865 | Soybean | golgi, plastid, vacuole | 68.75 | 67.29 |
| Solyc09g075850.2.1 | Tomato | golgi, peroxisome, plasma membrane | 66.83 | 65.57 |
| VIT_05s0020g03160.t01 | Wine grape | plasma membrane | 68.27 | 64.69 |
| PGSC0003DMT400081427 | Potato | golgi, peroxisome, plasma membrane | 65.62 | 64.39 |
| Zm00001d016727_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 23.56 | 58.33 |
| Zm00001d040150_P001 | Maize | endoplasmic reticulum, plasma membrane | 23.08 | 55.81 |
| TraesCS2D01G205700.1 | Wheat | plasma membrane | 56.49 | 55.42 |
| TraesCS2B01G225100.1 | Wheat | plasma membrane | 56.01 | 54.95 |
| TraesCS2A01G197700.1 | Wheat | plasma membrane | 56.01 | 54.82 |
| Os07t0571500-00 | Rice | plasma membrane | 56.01 | 54.57 |
| EER99579 | Sorghum | plasma membrane | 55.05 | 54.27 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 53.37 | 53.62 |
| GSMUA_Achr6P25070_001 | Banana | cytosol, peroxisome, plasma membrane | 50.0 | 52.0 |
| HORVU2Hr1G038330.2 | Barley | cytosol, plasma membrane, plastid | 56.49 | 43.93 |
Protein Annotations
| MapMan:35.1 | EntrezGene:827153 | ProteinID:AEE83528.1 | ArrayExpress:AT4G14950 | EnsemblPlantsGene:AT4G14950 | RefSeq:AT4G14950 |
| TAIR:AT4G14950 | RefSeq:AT4G14950-TAIR-G | EnsemblPlants:AT4G14950.1 | TAIR:AT4G14950.1 | EMBL:AY059730 | Unigene:At.21742 |
| EMBL:BT015780 | ProteinID:CAB46053.1 | ProteinID:CAB78537.1 | GO:GO:0000407 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0006810 | GO:GO:0006887 |
| GO:GO:0007029 | GO:GO:0007030 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0010256 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016192 | RefSeq:NP_567450.1 | PFAM:PF09335 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007115 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF68 |
| UniProt:Q5XF36 | InterPro:SNARE_assoc | TMHMM:TMhelix | UniParc:UPI0000162A43 | SEG:seg | : |
Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
Coordinates
chr4:+:8545025..8548086
Molecular Weight (calculated)
45850.3 Da
IEP (calculated)
7.714
GRAVY (calculated)
0.333
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.