Factsheet for Solyc09g075850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g120880.2.1
Solyc05g015640.2.1
Solyc06g074170.2.1
Solyc11g068750.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14950.1	Solyc05g015640.2.1	AT1G27300.1	21798944
AT4G14950.1	Solyc03g120880.2.1	AT3G16310.1	21798944
AT4G14950.1	Solyc06g074170.2.1	AT5G22290.1	21798944
AT4G14950.1	Solyc11g068750.1.1	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081427	Potato	golgi, peroxisome, plasma membrane	97.64	97.64
CDY22723	Canola	plasma membrane	57.55	69.32
Bra039706.1-P	Field mustard	plasma membrane	57.31	69.03
AT4G14950.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	65.57	66.83
AT1G05360.1	Thale cress	plasma membrane	65.33	66.59
CDY59789	Canola	mitochondrion, plasma membrane, plastid, vacuole	65.33	66.27
Bra032466.1-P	Field mustard	mitochondrion, plasma membrane, plastid, vacuole	65.33	66.27
CDY10028	Canola	endoplasmic reticulum, plasma membrane, vacuole	65.09	66.19
KRH27628	Soybean	cytosol, nucleus, plasma membrane	64.62	66.02
CDY54866	Canola	plasma membrane, plastid	64.86	65.01
VIT_05s0020g03160.t01	Wine grape	plasma membrane	66.51	64.24
Bra036917.1-P	Field mustard	plasma membrane	58.02	64.06
KRH77865	Soybean	golgi, plastid, vacuole	63.21	63.06
CDY09041	Canola	plasma membrane	63.68	62.79
CDY50267	Canola	plastid	50.47	59.28
Solyc01g099140.2.1	Tomato	peroxisome	57.55	57.55
Zm00001d016727_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	21.7	54.76
TraesCS2D01G205700.1	Wheat	plasma membrane	53.3	53.3
TraesCS2A01G197700.1	Wheat	plasma membrane	53.3	53.18
TraesCS2B01G225100.1	Wheat	plasma membrane	52.83	52.83
Os07t0571500-00	Rice	plasma membrane	52.83	52.46
Zm00001d040150_P001	Maize	endoplasmic reticulum, plasma membrane	21.23	52.33
GSMUA_Achr6P25070_001	Banana	cytosol, peroxisome, plasma membrane	48.35	51.25
Zm00001d021861_P001	Maize	cytosol, peroxisome, plasma membrane	49.53	50.72
EER99579	Sorghum	plasma membrane	50.24	50.47
CDX93269	Canola	mitochondrion	9.2	43.82
HORVU2Hr1G038330.2	Barley	cytosol, plasma membrane, plastid	54.72	43.36

Protein Annotations

MapMan:35.1	GO:GO:0000407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006810	GO:GO:0006887	GO:GO:0007029	GO:GO:0007030	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	UniProt:K4CVG2	PFAM:PF09335
PANTHER:PTHR10281	PANTHER:PTHR10281:SF68	InterPro:SNARE_assoc	EnsemblPlantsGene:Solyc09g075850.2	EnsemblPlants:Solyc09g075850.2.1	TMHMM:TMhelix
UniParc:UPI000276BD63	:	:	:	:	:

Description

No Description!

Coordinates

chr9:-:67484266..67491823

Molecular Weight (calculated)

47589.9 Da

IEP (calculated)

10.120

GRAVY (calculated)

0.228

Length

424 amino acids

Sequence
(BLAST)

001: MGSKKKTASQ KNSRSASPVK EMAISDLTAK HQKDLENLNL LTQPFRTLKL FSMAMMQYLM RSIAYLLSHR WCMLFSMIAG LALILLVTTD GPHVKHVEEV
101: GRYLQFGLWW VALGVASSIG LGSGLHTFVL YLGPHIALFT IKAMKCGRVD LKMAPYDTIQ FQKTPLWLHK DCSEFGPPVF SSSHGTSVPL SSILLQVQLE
201: AVLWGLGTAL GELPPYFISR AASLSGSKVE AMEELDASSE NNGFIATRLT QMKRWFFSHA QCLNFFTILI LASVPNPLFD LAGIMCGQFG IPFWKFFFAT
301: LIGKAIIKTH IQTVFIISVC NNQLLYWVET KMIRMLSFIP GLETMLPKII AKLHSMKDKY MATKTPSTSN IKVNKWDFSF ASVWNGVVTI MLLNFFVKIV
401: NATAQRYLKK QQEEELASLK NKSS

Best Arabidopsis Sequence Match ( AT4G14950.1 )
(BLAST)

001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD

Arabidopsis Description

KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.