Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 4
- extracellular 3
- vacuole 3
- plasma membrane 4
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016727_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 77.33 | 79.17 |
| CDX93269 | Canola | mitochondrion | 16.86 | 32.58 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 76.16 | 31.64 |
| EER99579 | Sorghum | plasma membrane | 72.67 | 29.62 |
| TraesCS2A01G197700.1 | Wheat | plasma membrane | 66.86 | 27.06 |
| Bra039706.1-P | Field mustard | plasma membrane | 55.23 | 26.99 |
| CDY22723 | Canola | plasma membrane | 55.23 | 26.99 |
| TraesCS2D01G205700.1 | Wheat | plasma membrane | 66.28 | 26.89 |
| TraesCS2B01G225100.1 | Wheat | plasma membrane | 65.7 | 26.65 |
| Os07t0571500-00 | Rice | plasma membrane | 65.7 | 26.46 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 55.81 | 25.0 |
| KRH27628 | Soybean | cytosol, nucleus, plasma membrane | 58.14 | 24.1 |
| GSMUA_Achr6P25070_001 | Banana | cytosol, peroxisome, plasma membrane | 55.23 | 23.75 |
| Bra036917.1-P | Field mustard | plasma membrane | 52.91 | 23.7 |
| AT4G14950.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 55.81 | 23.08 |
| KRH77865 | Soybean | golgi, plastid, vacuole | 56.98 | 23.06 |
| CDY59789 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 55.23 | 22.73 |
| Bra032466.1-P | Field mustard | mitochondrion, plasma membrane, plastid, vacuole | 55.23 | 22.73 |
| PGSC0003DMT400063650 | Potato | cytosol, nucleus, peroxisome | 55.81 | 22.64 |
| Solyc01g099140.2.1 | Tomato | peroxisome | 55.81 | 22.64 |
| Zm00001d048902_P004 | Maize | plasma membrane | 56.98 | 22.63 |
| AT1G05360.1 | Thale cress | plasma membrane | 54.65 | 22.6 |
| CDY10028 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 54.65 | 22.54 |
| CDY09041 | Canola | plasma membrane | 55.81 | 22.33 |
| VIT_05s0020g03160.t01 | Wine grape | plasma membrane | 56.98 | 22.32 |
| GSMUA_Achr3P29660_001 | Banana | plasma membrane | 54.65 | 22.01 |
| CDY54866 | Canola | plasma membrane, plastid | 54.07 | 21.99 |
| CDY50267 | Canola | plastid | 45.93 | 21.88 |
| Solyc09g075850.2.1 | Tomato | golgi, peroxisome, plasma membrane | 52.33 | 21.23 |
| PGSC0003DMT400081427 | Potato | golgi, peroxisome, plasma membrane | 52.33 | 21.23 |
| HORVU2Hr1G038330.2 | Barley | cytosol, plasma membrane, plastid | 65.7 | 21.12 |
| Zm00001d043275_P002 | Maize | mitochondrion, plasma membrane | 55.23 | 20.93 |
| GSMUA_Achr6P25060_001 | Banana | extracellular | 8.14 | 7.07 |
Protein Annotations
| EnsemblPlants:Zm00001d040150_P001 | EnsemblPlants:Zm00001d040150_T001 | EnsemblPlantsGene:Zm00001d040150 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR10281 | PANTHER:PTHR10281:SF48 | ProteinID:ONM30647.1 | TMHMM:TMhelix | UniParc:UPI000844E2C7 | UniProt:A0A1D6MNF0 |
| MapMan:35.1 | : | : | : | : | : |
Description
Vacuole membrane protein KMS1
Coordinates
chr3:+:29240217..29240918
Molecular Weight (calculated)
19677.4 Da
IEP (calculated)
7.500
GRAVY (calculated)
0.481
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPFRLEDEV IFRWCVTLVL SLMQHLQELL WYVRFGLWWI ILGVASSIGL GSGLHTFIMY LAPHVALFTI KAVQCGRVDL KSAPYDTILL ERRPSWLEKD
101: CLQFGPPIYH ETIPFSKILQ EVYLEAILWG IGTALGELPP YFLSRTGSVH TALRTKYNII YLITAVFSCL ST
101: CLQFGPPIYH ETIPFSKILQ EVYLEAILWG IGTALGELPP YFLSRTGSVH TALRTKYNII YLITAVFSCL ST
001: MGYGNRASSK TPAISGLREK HQQDLEKLTL TSQPFKTLRL FVVAVFLYVR RWSSYLLANV GWLILFCSIF VAFAALLVTL DGPHVKHVEE LSEYTRFGLW
101: WIFLGVASSI GLGSGLHTFV LYLGPHIALF TIKVMQCGRV DLKSAIYDTI QLKRSPSWLD KPCHEFGSPV FSSGVPLSSI LPQVQIEAIL WGLGTALGEL
201: PPYFISRAAS LSGGKMKELE TCSGDDNGFI AKRVNQIKSW LLSHSQYLNF FTILILASVP NPLFDLAGIM CGQFEKPFWE FFLATLIGKA IIKTHIQTVF
301: IICVCNNQLL DWVENELIYI LSFVPGFASA LPELTAKLRL MKEKYLIASP PVSSDINVKK WDLSFASVWN GVVWLMLLNF FGQIVTSTAQ RYLKKQQEEE
401: LDALTNKSSL TSKKSK
101: WIFLGVASSI GLGSGLHTFV LYLGPHIALF TIKVMQCGRV DLKSAIYDTI QLKRSPSWLD KPCHEFGSPV FSSGVPLSSI LPQVQIEAIL WGLGTALGEL
201: PPYFISRAAS LSGGKMKELE TCSGDDNGFI AKRVNQIKSW LLSHSQYLNF FTILILASVP NPLFDLAGIM CGQFEKPFWE FFLATLIGKA IIKTHIQTVF
301: IICVCNNQLL DWVENELIYI LSFVPGFASA LPELTAKLRL MKEKYLIASP PVSSDINVKK WDLSFASVWN GVVWLMLLNF FGQIVTSTAQ RYLKKQQEEE
401: LDALTNKSSL TSKKSK
Arabidopsis Description
KMS2Vacuole membrane protein KMS2 [Source:UniProtKB/Swiss-Prot;Acc:F4I8Q7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.