Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | plasma membrane | 65.57 | 72.92 |
| GSMUA_Achr6P25070_001 | Banana | cytosol, peroxisome, plasma membrane | 55.74 | 59.5 |
| TraesCS2A01G197700.1 | Wheat | plasma membrane | 58.78 | 59.06 |
| TraesCS2D01G205700.1 | Wheat | plasma membrane | 58.55 | 58.96 |
| TraesCS2B01G225100.1 | Wheat | plasma membrane | 58.31 | 58.73 |
| Os07t0571500-00 | Rice | plasma membrane | 58.31 | 58.31 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 55.97 | 57.73 |
| Zm00001d016727_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 22.48 | 57.14 |
| EER99579 | Sorghum | plasma membrane | 56.44 | 57.11 |
| Zm00001d040150_P001 | Maize | endoplasmic reticulum, plasma membrane | 22.01 | 54.65 |
| GSMUA_Achr6P25060_001 | Banana | extracellular | 23.89 | 51.52 |
| HORVU2Hr1G038330.2 | Barley | cytosol, plasma membrane, plastid | 58.08 | 46.36 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P29660_001 | EnsemblPlants:GSMUA_Achr3T29660_001 | EnsemblPlantsGene:GSMUA_Achr3G29660_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SNARE_assoc | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF68 | PFAM:PF09335 | TMHMM:TMhelix | UniParc:UPI0002967EA4 |
| UniProt:M0SIY2 | MapMan:35.1 | : | : | : | : |
Description
Putative Transmembrane protein 49 [Source:GMGC_GENE;Acc:GSMUA_Achr3G29660_001]
Coordinates
chr3:+:28715682..28724078
Molecular Weight (calculated)
47729.0 Da
IEP (calculated)
9.778
GRAVY (calculated)
0.360
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGEAAAAH RSPEELETLI SELQKKHQMD LLNLTLTTQP FKTLQFFIFA TLQYLRRSLV YILAKGGWIL VLSLPVFAVG LLLFSVDGPH EKHIQEFIHY
101: TKFSLWWVAL GVASSIGLGS GLHTFVLYLG PHIAFFTIKA MKCGRVDLKA APYDTIQLKM SPSWLEKDCS EFGPPVFPPL PGSLVRVPLS SILPQVQLEA
201: ILWGLGTALG ELPPYFIARA ARLSGNKAGA VEELDAASSK QDGFLSFYLK KIKRWLLSHS QHLNFFTILV LASVPNPLFD LAGILCGQFG IPFWKFFLAT
301: LTGKAIIKAH IQTVSIISLC NNQLLEWMEK ELIWVFGFIP GFSSVLPNLV TKLHMAQEKY LSASVPGSTL SDGMAKRWNL SFSLIWNTVI WLMLINFFAK
401: IVAATAQRYL KKQQELELTR VKQMTIT
101: TKFSLWWVAL GVASSIGLGS GLHTFVLYLG PHIAFFTIKA MKCGRVDLKA APYDTIQLKM SPSWLEKDCS EFGPPVFPPL PGSLVRVPLS SILPQVQLEA
201: ILWGLGTALG ELPPYFIARA ARLSGNKAGA VEELDAASSK QDGFLSFYLK KIKRWLLSHS QHLNFFTILV LASVPNPLFD LAGILCGQFG IPFWKFFLAT
301: LTGKAIIKAH IQTVSIISLC NNQLLEWMEK ELIWVFGFIP GFSSVLPNLV TKLHMAQEKY LSASVPGSTL SDGMAKRWNL SFSLIWNTVI WLMLINFFAK
401: IVAATAQRYL KKQQELELTR VKQMTIT
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.