Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 4
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040150_P001 | Maize | endoplasmic reticulum, plasma membrane | 79.17 | 77.33 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 83.93 | 34.06 |
| CDX93269 | Canola | mitochondrion | 17.26 | 32.58 |
| EER99579 | Sorghum | plasma membrane | 77.98 | 31.04 |
| Bra039706.1-P | Field mustard | plasma membrane | 59.52 | 28.41 |
| CDY22723 | Canola | plasma membrane | 59.52 | 28.41 |
| TraesCS2A01G197700.1 | Wheat | plasma membrane | 69.64 | 27.53 |
| TraesCS2D01G205700.1 | Wheat | plasma membrane | 69.05 | 27.36 |
| TraesCS2B01G225100.1 | Wheat | plasma membrane | 68.45 | 27.12 |
| Os07t0571500-00 | Rice | plasma membrane | 66.67 | 26.23 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 58.33 | 25.52 |
| GSMUA_Achr6P25070_001 | Banana | cytosol, peroxisome, plasma membrane | 60.12 | 25.25 |
| Bra036917.1-P | Field mustard | plasma membrane | 55.95 | 24.48 |
| KRH27628 | Soybean | cytosol, nucleus, plasma membrane | 58.93 | 23.86 |
| AT4G14950.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 58.33 | 23.56 |
| CDY09041 | Canola | plasma membrane | 59.52 | 23.26 |
| CDY50267 | Canola | plastid | 49.4 | 22.99 |
| Zm00001d048902_P004 | Maize | plasma membrane | 58.93 | 22.86 |
| AT1G05360.1 | Thale cress | plasma membrane | 56.55 | 22.84 |
| VIT_05s0020g03160.t01 | Wine grape | plasma membrane | 59.52 | 22.78 |
| PGSC0003DMT400063650 | Potato | cytosol, nucleus, peroxisome | 57.14 | 22.64 |
| Solyc01g099140.2.1 | Tomato | peroxisome | 57.14 | 22.64 |
| KRH77865 | Soybean | golgi, plastid, vacuole | 57.14 | 22.59 |
| CDY59789 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 55.95 | 22.49 |
| Bra032466.1-P | Field mustard | mitochondrion, plasma membrane, plastid, vacuole | 55.95 | 22.49 |
| GSMUA_Achr3P29660_001 | Banana | plasma membrane | 57.14 | 22.48 |
| CDY54866 | Canola | plasma membrane, plastid | 56.55 | 22.46 |
| CDY10028 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 55.36 | 22.3 |
| Solyc09g075850.2.1 | Tomato | golgi, peroxisome, plasma membrane | 54.76 | 21.7 |
| PGSC0003DMT400081427 | Potato | golgi, peroxisome, plasma membrane | 54.76 | 21.7 |
| HORVU2Hr1G038330.2 | Barley | cytosol, plasma membrane, plastid | 69.05 | 21.68 |
| Zm00001d043275_P002 | Maize | mitochondrion, plasma membrane | 57.14 | 21.15 |
| GSMUA_Achr6P25060_001 | Banana | extracellular | 7.14 | 6.06 |
Protein Annotations
| EnsemblPlants:Zm00001d016727_P001 | EnsemblPlants:Zm00001d016727_T001 | EnsemblPlantsGene:Zm00001d016727 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR10281 | PANTHER:PTHR10281:SF48 | ProteinID:AQK71555.1 | SignalP:SignalP-TM | TMHMM:TMhelix | UniParc:UPI0004DEBB4C |
| UniProt:A0A1D6HA22 | MapMan:35.1 | : | : | : | : |
Description
Vacuole membrane protein KMS1
Coordinates
chr5:-:174365786..174367714
Molecular Weight (calculated)
19121.6 Da
IEP (calculated)
7.039
GRAVY (calculated)
0.502
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLVVATWVL LMFTDGLNEK HLQELLWYVR FGLWWIILGV ASSIGLGSGL HTFIMYLAPH VALFTIKAVQ CGRVDLKSAP YDTILLERRP SWLEKDCLQF
101: GPPIYHETIP FSKILQEVYL EDILWSIGTA LGELPPYFLS RTGSVHTALR TKYNIIYLIT AVFSCLST
101: GPPIYHETIP FSKILQEVYL EDILWSIGTA LGELPPYFLS RTGSVHTALR TKYNIIYLIT AVFSCLST
001: MGYGNRASSK TPAISGLREK HQQDLEKLTL TSQPFKTLRL FVVAVFLYVR RWSSYLLANV GWLILFCSIF VAFAALLVTL DGPHVKHVEE LSEYTRFGLW
101: WIFLGVASSI GLGSGLHTFV LYLGPHIALF TIKVMQCGRV DLKSAIYDTI QLKRSPSWLD KPCHEFGSPV FSSGVPLSSI LPQVQIEAIL WGLGTALGEL
201: PPYFISRAAS LSGGKMKELE TCSGDDNGFI AKRVNQIKSW LLSHSQYLNF FTILILASVP NPLFDLAGIM CGQFEKPFWE FFLATLIGKA IIKTHIQTVF
301: IICVCNNQLL DWVENELIYI LSFVPGFASA LPELTAKLRL MKEKYLIASP PVSSDINVKK WDLSFASVWN GVVWLMLLNF FGQIVTSTAQ RYLKKQQEEE
401: LDALTNKSSL TSKKSK
101: WIFLGVASSI GLGSGLHTFV LYLGPHIALF TIKVMQCGRV DLKSAIYDTI QLKRSPSWLD KPCHEFGSPV FSSGVPLSSI LPQVQIEAIL WGLGTALGEL
201: PPYFISRAAS LSGGKMKELE TCSGDDNGFI AKRVNQIKSW LLSHSQYLNF FTILILASVP NPLFDLAGIM CGQFEKPFWE FFLATLIGKA IIKTHIQTVF
301: IICVCNNQLL DWVENELIYI LSFVPGFASA LPELTAKLRL MKEKYLIASP PVSSDINVKK WDLSFASVWN GVVWLMLLNF FGQIVTSTAQ RYLKKQQEEE
401: LDALTNKSSL TSKKSK
Arabidopsis Description
KMS2Vacuole membrane protein KMS2 [Source:UniProtKB/Swiss-Prot;Acc:F4I8Q7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.