Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27341663
|
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08797 | Sorghum | mitochondrion | 93.76 | 93.76 |
| Zm00001d043275_P002 | Maize | mitochondrion, plasma membrane | 90.53 | 86.34 |
| Os01t0778700-01 | Rice | plasma membrane | 80.83 | 79.91 |
| HORVU3Hr1G076520.1 | Barley | plasma membrane | 79.45 | 79.08 |
| TraesCS3D01G312800.1 | Wheat | plasma membrane | 78.29 | 78.29 |
| TraesCS3B01G347500.1 | Wheat | plasma membrane | 78.06 | 78.06 |
| TraesCS3A01G318400.1 | Wheat | plasma membrane | 78.29 | 77.93 |
| Zm00001d016727_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 22.86 | 58.93 |
| Zm00001d040150_P001 | Maize | endoplasmic reticulum, plasma membrane | 22.63 | 56.98 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 53.35 | 55.8 |
Protein Annotations
| EMBL:BT063182 | EnsemblPlants:Zm00001d048902_P004 | EnsemblPlants:Zm00001d048902_T004 | EnsemblPlantsGene:Zm00001d048902 | EntrezGene:100382109 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:SNARE_assoc | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF68 | PFAM:PF09335 |
| ProteinID:AQK49176.1 | TMHMM:TMhelix | UniParc:UPI0001948E80 | UniProt:C0P4G3 | MapMan:35.1 | : |
Description
Vacuole membrane protein KMS1
Coordinates
chr4:-:7406497..7414671
Molecular Weight (calculated)
48219.4 Da
IEP (calculated)
9.905
GRAVY (calculated)
0.256
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKMSAAA PPSRSWSNVG GSVIPELLAK HKMDLENLTL TKHPIRTLHF FLLAMLQYLK RLATYILRKS GLFFLLIVLV VASGILLSIS DGLHKKHVQE
101: FLNYAKFVLW WISLGVASSI GLGSGLHTFV LYLGPHIALF TIKAVQCGRI DLKTAPYDTI QLKVGPSWLD KKCSEFGPPV YPASAHSVRI PVFDLLPQIQ
201: LEAVLWGIGT ALGELPPYFI SRAARLSGSK SKAVKELDAA TSKEDGTVAS TLDRSKRWLL SHSQHLNFFS ILILASVPNP LFDLAGIMCG QFGVPFWEFF
301: FATLIGKAII KTHIQTLFIV SLCNNQLLYL MEKELIWIFG HIPGFSATLP SVIAKLHAAK DKYLSPPTPV SASSQMEEKS WNLSFTLVWN SIVWLVLLNF
401: SVKIITSTAQ DYLKKQQDME MERVSDSPPP EQN
101: FLNYAKFVLW WISLGVASSI GLGSGLHTFV LYLGPHIALF TIKAVQCGRI DLKTAPYDTI QLKVGPSWLD KKCSEFGPPV YPASAHSVRI PVFDLLPQIQ
201: LEAVLWGIGT ALGELPPYFI SRAARLSGSK SKAVKELDAA TSKEDGTVAS TLDRSKRWLL SHSQHLNFFS ILILASVPNP LFDLAGIMCG QFGVPFWEFF
301: FATLIGKAII KTHIQTLFIV SLCNNQLLYL MEKELIWIFG HIPGFSATLP SVIAKLHAAK DKYLSPPTPV SASSQMEEKS WNLSFTLVWN SIVWLVLLNF
401: SVKIITSTAQ DYLKKQQDME MERVSDSPPP EQN
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.