Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G347500.1 | Wheat | plasma membrane | 98.38 | 98.38 |
| TraesCS3A01G318400.1 | Wheat | plasma membrane | 95.15 | 94.71 |
| HORVU3Hr1G076520.1 | Barley | plasma membrane | 93.76 | 93.33 |
| Os01t0778700-01 | Rice | plasma membrane | 85.22 | 84.25 |
| EES08797 | Sorghum | mitochondrion | 79.68 | 79.68 |
| KXG33509 | Sorghum | mitochondrion | 79.21 | 78.67 |
| Zm00001d048902_P004 | Maize | plasma membrane | 78.29 | 78.29 |
| Zm00001d043275_P002 | Maize | mitochondrion, plasma membrane | 79.68 | 75.99 |
| TraesCS2D01G205700.1 | Wheat | plasma membrane | 55.89 | 57.08 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G312800.1 | EnsemblPlantsGene:TraesCS3D01G312800 | InterPro:SNARE_assoc | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF68 | PFAM:PF09335 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:427210204..427216824
Molecular Weight (calculated)
48684.6 Da
IEP (calculated)
9.395
GRAVY (calculated)
0.196
Length
433 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKATAGP ARGSSRADHG VISEIREKHK LELENLTLTK HPFRTLHFFN LAMLQYLKRS AAYILSKRAL FVLLTVMVVI PGVALLVTDG LHKKHVQEFL
101: NYARFVLWWV SLGVASSIGL GSGLHTFVLY LGPHIALFTI KAVQCGRVDL KTAPYDTILL KQAPSWLDKK CSEFGSPMYP SSDHSVMIPV FDLLPQVQLE
201: AVLWGIGTAL GELPPYFISR AARLSGSELE AVKELDVAPS SEDGPIASTV NRTKRWLLSH SQHLNFFTIL ILASVPNPLF DLAGIMCGQF GIPFWEFFFA
301: TLIGKAIIKT HIQTLFIISL CNNQLLYFME KELIWIFEHI PGFSATLPSV IAKLHSAKEK YLSPPVTVSP SQMEDKQWNF SFALVWNTVV WLVLVNFFIK
401: IVTSTAQDYR KRQQDIEMEL ITDSSPQNHS KTN
101: NYARFVLWWV SLGVASSIGL GSGLHTFVLY LGPHIALFTI KAVQCGRVDL KTAPYDTILL KQAPSWLDKK CSEFGSPMYP SSDHSVMIPV FDLLPQVQLE
201: AVLWGIGTAL GELPPYFISR AARLSGSELE AVKELDVAPS SEDGPIASTV NRTKRWLLSH SQHLNFFTIL ILASVPNPLF DLAGIMCGQF GIPFWEFFFA
301: TLIGKAIIKT HIQTLFIISL CNNQLLYFME KELIWIFEHI PGFSATLPSV IAKLHSAKEK YLSPPVTVSP SQMEDKQWNF SFALVWNTVV WLVLVNFFIK
401: IVTSTAQDYR KRQQDIEMEL ITDSSPQNHS KTN
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.