Factsheet for Os01t0778700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 3
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G347500.1	Wheat	plasma membrane	84.25	85.22
TraesCS3D01G312800.1	Wheat	plasma membrane	84.25	85.22
HORVU3Hr1G076520.1	Barley	plasma membrane	84.47	85.06
TraesCS3A01G318400.1	Wheat	plasma membrane	84.25	84.83
EES08797	Sorghum	mitochondrion	80.82	81.76
KXG33509	Sorghum	mitochondrion	80.59	80.96
Zm00001d048902_P004	Maize	plasma membrane	79.91	80.83
Zm00001d043275_P002	Maize	mitochondrion, plasma membrane	80.82	77.97
Os07t0571500-00	Rice	plasma membrane	57.76	59.25

Protein Annotations

MapMan:35.1	EntrezGene:4326431	EMBL:AK064933	ProteinID:BAD52840.1	ProteinID:BAF06342.1	ProteinID:BAS74625.1
GO:GO:0000407	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0006810	GO:GO:0006887	GO:GO:0007029	GO:GO:0007030	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	EnsemblPlantsGene:Os01g0778700	EnsemblPlants:Os01t0778700-01	PFAM:PF09335
PANTHER:PTHR10281	PANTHER:PTHR10281:SF68	UniProt:Q5ZCF3	InterPro:SNARE_assoc	TMHMM:TMhelix	UniParc:UPI0000446B8A
RefSeq:XP_015621516.1	SEG:seg	:	:	:	:

Description

Similar to Transmembrane protein 49. (Os01t0778700-01)

Coordinates

chr1:+:32956995..32963290

Molecular Weight (calculated)

48609.6 Da

IEP (calculated)

9.747

GRAVY (calculated)

0.252

Length

438 amino acids

Sequence
(BLAST)

001: MGRRKVAAAA AATPPRGSSK AGGGVISEIR EKHKLELENL TLTKHPFRTL RFFMLAMLQY LKRLATYILS KGALFVVLIV LVLAPGILLA VTDGLHKKHV
101: QEFLNYARFV LWWVSLGVAS SIGLGSGLHT FVLYLGPHIA LFTIKAVQCG RIDLKTAPYD TIQLKQGPSW LDKKCSDFGP PVYQASAHSV RIPVFELLPQ
201: VQLEAVLWGI GTALGELPPY FISRAARLSG SEPEAVKELD AAASDEHGPI ASTLNRTKRW LLSHSQHLNF ITILILASVP NPLFDLAGIM CGQFGIPFWE
301: FFFATLIGKA IIKTHIQTLF IISLCNNQLL YLMEKELIWI FGHIPGFSAS LPSVIAKLHS AKDKYLSTPT SATSSSKMED TQWNFSFTLV WNTVVWLVLV
401: NFFIKIVTST AQEYLKKQQD IEMELITDSS PQSQSKTN

Best Arabidopsis Sequence Match ( AT4G14950.1 )
(BLAST)

001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD

Arabidopsis Description

KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.