Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33509 | Sorghum | mitochondrion | 90.53 | 94.27 |
| Zm00001d048902_P004 | Maize | plasma membrane | 86.34 | 90.53 |
| Os01t0778700-01 | Rice | plasma membrane | 77.97 | 80.82 |
| HORVU3Hr1G076520.1 | Barley | plasma membrane | 76.87 | 80.23 |
| TraesCS3A01G318400.1 | Wheat | plasma membrane | 76.43 | 79.77 |
| TraesCS3D01G312800.1 | Wheat | plasma membrane | 75.99 | 79.68 |
| TraesCS3B01G347500.1 | Wheat | plasma membrane | 75.77 | 79.45 |
| Zm00001d016727_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 21.15 | 57.14 |
| Zm00001d040150_P001 | Maize | endoplasmic reticulum, plasma membrane | 20.93 | 55.23 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 50.0 | 54.83 |
Protein Annotations
| EntrezGene:100272491 | MapMan:35.1 | UniProt:A0A1D6N9Y5 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0042626 | GO:GO:0055085 | ProteinID:ONM37360.1 |
| ProteinID:ONM37368.1 | PFAM:PF09335 | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF68 | InterPro:SNARE_assoc | TMHMM:TMhelix |
| UniParc:UPI0008448072 | EnsemblPlantsGene:Zm00001d043275 | EnsemblPlants:Zm00001d043275_P002 | EnsemblPlants:Zm00001d043275_T002 | SEG:seg | : |
Description
Vacuole membrane protein KMS1
Coordinates
chr3:-:194095797..194102122
Molecular Weight (calculated)
50509.0 Da
IEP (calculated)
9.908
GRAVY (calculated)
0.269
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKMSAAA PPSRSWSNVG GSVIPELRAK HKTDLQNLTL TKQPLRTLHF FLLAMLQYLK RLATYILSKG GFFFLLIVLL VASGILLVVS DGLHKKHVQE
101: FLNYAKFVSW WVSLGVASSI GLGKFLFFHI QGLLKLETGT CSGLHTFVLY LGPHIALFTI KAVQCGRIDL KIAPYDTIQL KVGPSWLDKK CSEFGPPVYP
201: ASAHSVRIPV FDLLPQIQLE AVLWGIGTAL GELPPYFISR AARLSGSESK AVQELDAATS KEDGPVASSL NRTKRWLLSH SQHLNFFSIL ILASVPNPLF
301: DLAGIMCGQF GVPFWEFLFA TLIGKAIIKT HIQTLFIVSL CNNQLLYLIE KELIWIFGHV PGFSATLPSV IARLHAAKDK YLSPPAPVSP SSQMGEKQWN
401: FSFTSVWNSI VWLVLLNFFI KIVTSTAQDY LKKQQDTEME LISDSPIQDH SKTN
101: FLNYAKFVSW WVSLGVASSI GLGKFLFFHI QGLLKLETGT CSGLHTFVLY LGPHIALFTI KAVQCGRIDL KIAPYDTIQL KVGPSWLDKK CSEFGPPVYP
201: ASAHSVRIPV FDLLPQIQLE AVLWGIGTAL GELPPYFISR AARLSGSESK AVQELDAATS KEDGPVASSL NRTKRWLLSH SQHLNFFSIL ILASVPNPLF
301: DLAGIMCGQF GVPFWEFLFA TLIGKAIIKT HIQTLFIVSL CNNQLLYLIE KELIWIFGHV PGFSATLPSV IARLHAAKDK YLSPPAPVSP SSQMGEKQWN
401: FSFTSVWNSI VWLVLLNFFI KIVTSTAQDY LKKQQDTEME LISDSPIQDH SKTN
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.