Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G076520.1 | Barley | plasma membrane | 96.09 | 96.09 |
| TraesCS3B01G347500.1 | Wheat | plasma membrane | 95.4 | 95.84 |
| TraesCS3D01G312800.1 | Wheat | plasma membrane | 94.71 | 95.15 |
| Os01t0778700-01 | Rice | plasma membrane | 84.83 | 84.25 |
| EES08797 | Sorghum | mitochondrion | 79.54 | 79.91 |
| KXG33509 | Sorghum | mitochondrion | 79.31 | 79.13 |
| Zm00001d048902_P004 | Maize | plasma membrane | 77.93 | 78.29 |
| Zm00001d043275_P002 | Maize | mitochondrion, plasma membrane | 79.77 | 76.43 |
| TraesCS2A01G197700.1 | Wheat | plasma membrane | 55.63 | 56.94 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G318400.1 | EnsemblPlantsGene:TraesCS3A01G318400 | InterPro:SNARE_assoc | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF68 | PFAM:PF09335 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:559538427..559544592
Molecular Weight (calculated)
48832.8 Da
IEP (calculated)
9.395
GRAVY (calculated)
0.222
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKATAAG PARGSSRADH SVISEIREKH KLELENLTLT KHPFRTLHFF NLAMLQYLKR SVAYILSKRA LFVLLIVMVV IPGVALLVTD GLHKKHVQEF
101: LNYARFVLWW VSLGVASSIG LGSGLHTFVL YLGPHIALFT IKAVQCGRVD LKTAPYDTIL LKQAPSWLDK KCSEFGSPMY PSSDHSVMIP VIDLLPQVQL
201: EAVLWGIGTA LGELPPYFIS RAARLSGSEL EAVKELDVAP SSEDGPIAST VNRTKRWLLS HSQHLNFFTI LILASVPNPL FDLAGIMCGQ FGIPFWEFFF
301: ATLIGKAIIK THIQTLFIIS LCNNQLLYFL EKELIWIFDH IPGFSATLPS VIAKLHSAKE KYLSPPVSVS PSSQMEDKQW NFSFALVWNT VVWLVLVNFF
401: IKIVTSTAQD YRKRQQDIEM ELITDSSPQN HSKTN
101: LNYARFVLWW VSLGVASSIG LGSGLHTFVL YLGPHIALFT IKAVQCGRVD LKTAPYDTIL LKQAPSWLDK KCSEFGSPMY PSSDHSVMIP VIDLLPQVQL
201: EAVLWGIGTA LGELPPYFIS RAARLSGSEL EAVKELDVAP SSEDGPIAST VNRTKRWLLS HSQHLNFFTI LILASVPNPL FDLAGIMCGQ FGIPFWEFFF
301: ATLIGKAIIK THIQTLFIIS LCNNQLLYFL EKELIWIFDH IPGFSATLPS VIAKLHSAKE KYLSPPVSVS PSSQMEDKQW NFSFALVWNT VVWLVLVNFF
401: IKIVTSTAQD YRKRQQDIEM ELITDSSPQN HSKTN
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.