Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G318400.1 | Wheat | plasma membrane | 96.09 | 96.09 |
| TraesCS3B01G347500.1 | Wheat | plasma membrane | 93.33 | 93.76 |
| TraesCS3D01G312800.1 | Wheat | plasma membrane | 93.33 | 93.76 |
| Os01t0778700-01 | Rice | plasma membrane | 85.06 | 84.47 |
| EES08797 | Sorghum | mitochondrion | 80.69 | 81.06 |
| KXG33509 | Sorghum | mitochondrion | 80.69 | 80.5 |
| Zm00001d048902_P004 | Maize | plasma membrane | 79.08 | 79.45 |
| Zm00001d043275_P002 | Maize | mitochondrion, plasma membrane | 80.23 | 76.87 |
| HORVU2Hr1G038330.2 | Barley | cytosol, plasma membrane, plastid | 57.01 | 46.36 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G076520.1 | EnsemblPlantsGene:HORVU3Hr1G076520 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:SNARE_assoc |
| PANTHER:PTHR10281 | PANTHER:PTHR10281:SF68 | PFAM:PF09335 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B474A00 |
| UniProt:A0A287LRF8 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:568849153..568855449
Molecular Weight (calculated)
48560.5 Da
IEP (calculated)
9.224
GRAVY (calculated)
0.248
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKATAAG PARGSSRAGD GVISEIREKH KLELENLTLT KHPFKTLHFF MLAMLQYLKR SAAYILSKGA LFVVLIVLVV IPGVALLVTD GLHKKHVQEF
101: LNYARFVLWW VSLGVASSIG LGSGLHTFVL YLGPHIALFT IKAVQCGRVD LKTAPYDTIL LKQAPSWLDK KCSEFGSPMY PSSDHSVMIP VFDLLPQVQL
201: EAVLWGIGTA LGELPPYFIS RAARLSGSEL EAVKELDVAP SSEDGPIAST VNRTKRWLLS HSQHLNFFTI LILASVPNPL FDLAGIMCGQ FGIPFWEFFF
301: ATLIGKAIIK THIQTLFIIS LCNNQLLYFM EKELIWIFEH IPGFSATLPS VIAKLHSAKE KYLSPPVSVS PSSQMEDKQW NLSFALVWNS VVWLVLVNFF
401: IKIITSTAQD YRKRQQDVEM ELITDSSSQN HSKTN
101: LNYARFVLWW VSLGVASSIG LGSGLHTFVL YLGPHIALFT IKAVQCGRVD LKTAPYDTIL LKQAPSWLDK KCSEFGSPMY PSSDHSVMIP VFDLLPQVQL
201: EAVLWGIGTA LGELPPYFIS RAARLSGSEL EAVKELDVAP SSEDGPIAST VNRTKRWLLS HSQHLNFFTI LILASVPNPL FDLAGIMCGQ FGIPFWEFFF
301: ATLIGKAIIK THIQTLFIIS LCNNQLLYFM EKELIWIFEH IPGFSATLPS VIAKLHSAKE KYLSPPVSVS PSSQMEDKQW NLSFALVWNS VVWLVLVNFF
401: IKIITSTAQD YRKRQQDVEM ELITDSSSQN HSKTN
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.