Factsheet for Os07t0571500-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os02t0509600-01
Os02t0643000-01
Os04t0534400-01
Os05t0520100-00
Os08t0156700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14950.1	Os02t0509600-01	AT1G27300.1	21798944
AT4G14950.1	Os01t0200500-01	AT3G16310.1	21798944
AT4G14950.1	Os05t0520100-00	AT3G16310.1	21798944
AT4G14950.1	Os02t0643000-01	AT3G60600.1	21798944
AT4G14950.1	Os04t0534400-01	AT3G60600.1	21798944
AT4G14950.1	Os08t0156700-01	AT3G60600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G197700.1	Wheat	plasma membrane	80.33	80.71
TraesCS2D01G205700.1	Wheat	plasma membrane	79.86	80.42
TraesCS2B01G225100.1	Wheat	plasma membrane	79.63	80.19
EER99579	Sorghum	plasma membrane	72.6	73.46
Zm00001d021861_P001	Maize	cytosol, peroxisome, plasma membrane	69.79	71.98
Zm00001d016727_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	26.23	66.67
Zm00001d040150_P001	Maize	endoplasmic reticulum, plasma membrane	26.46	65.7
HORVU2Hr1G038330.2	Barley	cytosol, plasma membrane, plastid	79.39	63.36
GSMUA_Achr3P29660_001	Banana	plasma membrane	58.31	58.31
GSMUA_AchrUn_...	Banana	plasma membrane	52.22	58.07
CDY22723	Canola	plasma membrane	47.78	57.95
Bra039706.1-P	Field mustard	plasma membrane	47.78	57.95
Os01t0778700-01	Rice	plasma membrane	59.25	57.76
KRH27628	Soybean	cytosol, nucleus, plasma membrane	55.5	57.11
AT4G14950.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	54.57	56.01
AT1G05360.1	Thale cress	plasma membrane	54.33	55.77
CDY10028	Canola	endoplasmic reticulum, plasma membrane, vacuole	54.33	55.64
KRH77865	Soybean	golgi, plastid, vacuole	55.04	55.29
CDY59789	Canola	mitochondrion, plasma membrane, plastid, vacuole	53.86	55.02
Bra032466.1-P	Field mustard	mitochondrion, plasma membrane, plastid, vacuole	53.86	55.02
CDY54866	Canola	plasma membrane, plastid	53.86	54.37
Bra036917.1-P	Field mustard	plasma membrane	48.48	53.91
CDY09041	Canola	plasma membrane	54.1	53.72
Solyc09g075850.2.1	Tomato	golgi, peroxisome, plasma membrane	52.46	52.83
VIT_05s0020g03160.t01	Wine grape	plasma membrane	54.1	52.62
PGSC0003DMT400081427	Potato	golgi, peroxisome, plasma membrane	52.22	52.59
PGSC0003DMT400063650	Potato	cytosol, nucleus, peroxisome	51.99	52.36
Solyc01g099140.2.1	Tomato	peroxisome	51.76	52.12
CDY50267	Canola	plastid	42.86	50.69
GSMUA_Achr6P25070_001	Banana	cytosol, peroxisome, plasma membrane	47.31	50.5
CDX93269	Canola	mitochondrion	9.37	44.94
GSMUA_Achr6P25060_001	Banana	extracellular	17.8	38.38

Protein Annotations

MapMan:35.1	EntrezGene:9267646	UniProt:A0A0P0X7S2	ProteinID:BAT02237.1	GO:GO:0000407	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006887
GO:GO:0007029	GO:GO:0007030	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016043	EnsemblPlantsGene:Os07g0571500	EnsemblPlants:Os07t0571500-00	PFAM:PF09335	PANTHER:PTHR10281	PANTHER:PTHR10281:SF48
InterPro:SNARE_assoc	TMHMM:TMhelix	UniParc:UPI0001C7D0E6	RefSeq:XP_015644555.1	SEG:seg	:

Description

Similar to Transmembrane protein 49. (Os07t0571500-00)

Coordinates

chr7:-:23070015..23074573

Molecular Weight (calculated)

47349.3 Da

IEP (calculated)

8.825

GRAVY (calculated)

0.335

Length

427 amino acids

Sequence
(BLAST)

001: MGPAAADDAA AGEDQALSDL REKHQFDLER LTLTSQPLRT LALFALAIGQ SIKSTCLCVL KDSARLKFLV LLVASACTPL LLTNGPHEKH VQELLWYIRF
101: GLWWVILGVA SSIGLGSGLH TFVLYLGPHI ALFTIKAVHC GRTDLKSAPY DTILLKMRPS WLEKDCLEFG PPMYQETIPF SKILHEVHLE AVLWGIGTAL
201: GELPPYFLSR AASMSGRKLD ELEELDASVS GEGFLSSTLH RAKRWLMSHS QYLNFPTILL LASVPNPLFD LAGILCGQFN IPFWKFFLAT LIGKAVIKVY
301: IQTTLVITLC NNQLLDLVEK RIMWVFGNVP MVSSVLPSLV AKLKTAKSKF LSSSVAASAS SVVKETKWNL SFSLIWNTVV WLLIMNFIVQ IITSTAQSYL
401: KRQQELEIRK KLSATIQTVS ETTGLSN

Best Arabidopsis Sequence Match ( AT4G14950.1 )
(BLAST)

001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD

Arabidopsis Description

KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.