Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g099140.2.1 | Tomato | peroxisome | 96.93 | 96.93 |
| PGSC0003DMT400081427 | Potato | golgi, peroxisome, plasma membrane | 57.31 | 57.31 |
| Zm00001d016727_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 22.64 | 57.14 |
| Zm00001d040150_P001 | Maize | endoplasmic reticulum, plasma membrane | 22.64 | 55.81 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 52.12 | 53.38 |
| EER99579 | Sorghum | plasma membrane | 52.36 | 52.61 |
| TraesCS2B01G225100.1 | Wheat | plasma membrane | 52.12 | 52.12 |
| TraesCS2D01G205700.1 | Wheat | plasma membrane | 52.12 | 52.12 |
| Os07t0571500-00 | Rice | plasma membrane | 52.36 | 51.99 |
| TraesCS2A01G197700.1 | Wheat | plasma membrane | 51.89 | 51.76 |
| GSMUA_Achr6P25070_001 | Banana | cytosol, peroxisome, plasma membrane | 45.99 | 48.75 |
| HORVU2Hr1G038330.2 | Barley | cytosol, plasma membrane, plastid | 52.36 | 41.5 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400063650 | EnsemblPlantsGene:PGSC0003DMG400024740 | EntrezGene:102588210 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ncoils:Coil | PANTHER:PTHR10281 | PANTHER:PTHR10281:SF44 | PGSC:PGSC0003DMG400024740 | RefSeq:XP_006344618.1 | TMHMM:TMhelix |
| UniParc:UPI000296C74F | UniProt:M1CAY7 | MapMan:35.1 | : | : | : |
Description
Vacuole membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024740]
Coordinates
chr1:-:76938814..76947148
Molecular Weight (calculated)
46911.4 Da
IEP (calculated)
8.555
GRAVY (calculated)
0.213
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLEQEQLL DSPLHVDNSA SAGLLDKHNR ELEHLSLTNQ PLKTVKFFCL AVLKCLHQFS VNTMKCNCLV VILLASAGGS LLFTRGRAYE ETLQPVQELL
101: RYLRFGLWWL VLGVASSIGL GSGLHTFVLY LGPHIALFTI KSVSCGRVDI KSAPYDTIQL RSGPSWLDKD CSEFGPPLFS LPGARVPLTS ILNQIQLEAI
201: LWGIGTALGE LPPYFISRAA SISGREGELM EDLDSASKED SGIISNHLKQ IKKWLLSNRQ YLNFFTILVL ASVPNPLFDL AGIMCGQFGI PFWKFFTATL
301: IGKAIIKTHI QTAFIISVCN NQLLDLIENQ SVRVLGLIPG VASFLPNIIS KLHTAREKYM VASPPVSSVK AKKWDLSLGS VWNTVVWLML LNFSAKIVNT
401: TAKGYLREQQ EKELAALENN RARE
101: RYLRFGLWWL VLGVASSIGL GSGLHTFVLY LGPHIALFTI KSVSCGRVDI KSAPYDTIQL RSGPSWLDKD CSEFGPPLFS LPGARVPLTS ILNQIQLEAI
201: LWGIGTALGE LPPYFISRAA SISGREGELM EDLDSASKED SGIISNHLKQ IKKWLLSNRQ YLNFFTILVL ASVPNPLFDL AGIMCGQFGI PFWKFFTATL
301: IGKAIIKTHI QTAFIISVCN NQLLDLIENQ SVRVLGLIPG VASFLPNIIS KLHTAREKYM VASPPVSSVK AKKWDLSLGS VWNTVVWLML LNFSAKIVNT
401: TAKGYLREQQ EKELAALENN RARE
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.