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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:
  • mitochondrion 1
  • golgi 2
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g075850.2.1 Tomato golgi, peroxisome, plasma membrane 97.64 97.64
CDY22723 Canola plasma membrane 56.84 68.47
Bra039706.1-P Field mustard plasma membrane 56.6 68.18
KRH27628 Soybean cytosol, nucleus, plasma membrane 64.39 65.78
AT4G14950.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 64.39 65.62
AT1G05360.1 Thale cress plasma membrane 64.39 65.62
CDY59789 Canola mitochondrion, plasma membrane, plastid, vacuole 64.39 65.31
Bra032466.1-P Field mustard mitochondrion, plasma membrane, plastid, vacuole 64.39 65.31
CDY10028 Canola endoplasmic reticulum, plasma membrane, vacuole 64.15 65.23
CDY54866 Canola plasma membrane, plastid 63.21 63.36
VIT_05s0020g03160.t01 Wine grape plasma membrane 65.33 63.1
KRH77865 Soybean golgi, plastid, vacuole 62.97 62.82
Bra036917.1-P Field mustard plasma membrane 56.84 62.76
CDY09041 Canola plasma membrane 62.26 61.4
CDY50267 Canola plastid 49.53 58.17
PGSC0003DMT400063650 Potato cytosol, nucleus, peroxisome 57.31 57.31
Zm00001d016727_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 21.7 54.76
TraesCS2D01G205700.1 Wheat plasma membrane 52.59 52.59
TraesCS2A01G197700.1 Wheat plasma membrane 52.59 52.47
Zm00001d040150_P001 Maize endoplasmic reticulum, plasma membrane 21.23 52.33
Os07t0571500-00 Rice plasma membrane 52.59 52.22
TraesCS2B01G225100.1 Wheat plasma membrane 52.12 52.12
GSMUA_Achr6P25070_001 Banana cytosol, peroxisome, plasma membrane 47.64 50.5
EER99579 Sorghum plasma membrane 49.53 49.76
Zm00001d021861_P001 Maize cytosol, peroxisome, plasma membrane 48.58 49.76
CDX93269 Canola mitochondrion 9.2 43.82
HORVU2Hr1G038330.2 Barley cytosol, plasma membrane, plastid 53.77 42.62
Protein Annotations
EnsemblPlants:PGSC0003DMT400081427EnsemblPlantsGene:PGSC0003DMG400031833EntrezGene:102593401GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:SNARE_assocncoils:CoilPANTHER:PTHR10281PANTHER:PTHR10281:SF68PFAM:PF09335PGSC:PGSC0003DMG400031833
RefSeq:XP_006359916.1TMHMM:TMhelixUniParc:UPI000296E299UniProt:M1D4R6MapMan:35.1:
Description
Vacuole membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400031833]
Coordinates
chr9:-:53334411..53342337
Molecular Weight (calculated)
47688.1 Da
IEP (calculated)
10.141
GRAVY (calculated)
0.217
Length
424 amino acids
Sequence
(BLAST)
001: MGSKKKTASQ KNSRSASPVK EMAISDHSAK HQKDLENLNL LTQPFRTLKL FSMAMMQYLM KLIAYLLSHR WCMLFSMIAG LALILLVTTD GPHVKHVEEV
101: LKHLQFGLWW VALGVASSIG LGSGLHTFVL YLGPHIALFT IKAMKCGRVD LKMAPYDTIQ FQKTPLWLHK DCSEFGPPVF SSSHGTSVPL SSILLQVQLE
201: AVLWGLGTAL GELPPYFISR AASLSGSKVE AMEELDTSSE NNGFITTRLT QMKRWFFSHA QCLNFFTILI LASVPNPLFD LAGIMCGQFG IPFWKFFFAT
301: LIGKAIIKTH IQTVFIISVC NNQLLYWVET KMIRMLSFIP GLETMLPKII AKLHSMKDKY MATKTPSTSN IKVNKWDFSF ASVWNGVVTI MLLNFFVKIV
401: NATAQRYLKR QQEEELASLK NKSS
Best Arabidopsis Sequence Match ( AT4G14950.1 )
(BLAST)
001: MGSAGVASSS SDVAISALRE KHEKEVENLT LTTQPLNTLK LFVEATIQYI KRSISYLLAH GGWFILITTL LVVSGGLLVT VDGPHGKHVE EVLEYVRYGL
101: WWIALGVASS IGLGSGLHTF VLYLGPHIAL FTLKATLCGR VDLKSAPYDT IQLKRVPSWL DKSCSEFGPP LMISAAGSRV PLTSILPQVQ LEAILWGIGT
201: ALGELPPYFI SRAASISGST VDGMEELDGS STEDSGFMAT HLNRVKRWLL THSQHLNFFT VLVLASVPNP LFDLAGIMCG QFGIPFWEFF LATLIGKAII
301: KTHIQTIFII CVCNNQLLDW MENELIWILS HVPGLASMLP GLTAKLHAMK EKYIDAPSPV PSHIKVKKWD FSFASIWNGI VWLMLLNFFV KIVTATAQRH
401: LKKKQEKEMA TLTHSD
Arabidopsis Description
KMS1Vacuole membrane protein KMS1 [Source:UniProtKB/Swiss-Prot;Acc:Q5XF36]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.