Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d016727_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 32.58 | 17.26 |
| Zm00001d040150_P001 | Maize | endoplasmic reticulum, plasma membrane | 32.58 | 16.86 |
| CDY22723 | Canola | plasma membrane | 46.07 | 11.65 |
| CDY10028 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 53.93 | 11.51 |
| CDY59789 | Canola | mitochondrion, plasma membrane, plastid, vacuole | 53.93 | 11.48 |
| TraesCS2A01G197700.1 | Wheat | plasma membrane | 49.44 | 10.35 |
| EER99579 | Sorghum | plasma membrane | 48.31 | 10.19 |
| Zm00001d021861_P001 | Maize | cytosol, peroxisome, plasma membrane | 47.19 | 10.14 |
| TraesCS2B01G225100.1 | Wheat | plasma membrane | 48.31 | 10.14 |
| TraesCS2D01G205700.1 | Wheat | plasma membrane | 47.19 | 9.91 |
| GSMUA_Achr6P25070_001 | Banana | cytosol, peroxisome, plasma membrane | 43.82 | 9.75 |
| KRH27628 | Soybean | cytosol, nucleus, plasma membrane | 44.94 | 9.64 |
| CDY09041 | Canola | plasma membrane | 46.07 | 9.53 |
| CDY50267 | Canola | plastid | 38.2 | 9.42 |
| Os07t0571500-00 | Rice | plasma membrane | 44.94 | 9.37 |
| CDY54866 | Canola | plasma membrane, plastid | 43.82 | 9.22 |
| Solyc09g075850.2.1 | Tomato | golgi, peroxisome, plasma membrane | 43.82 | 9.2 |
| PGSC0003DMT400081427 | Potato | golgi, peroxisome, plasma membrane | 43.82 | 9.2 |
| KRH77865 | Soybean | golgi, plastid, vacuole | 43.82 | 9.18 |
| VIT_05s0020g03160.t01 | Wine grape | plasma membrane | 43.82 | 8.88 |
| HORVU2Hr1G038330.2 | Barley | cytosol, plasma membrane, plastid | 47.19 | 7.85 |
Protein Annotations
| EnsemblPlants:CDX93269 | EnsemblPlantsGene:GSBRNA2T00155227001 | ProteinID:CDX93269 | ProteinID:CDX93269.1 | UniParc:UPI0004EE9F2D | MapMan:35.1 |
Description
BnaC04g46270D
Coordinates
chrLK031875:-:666745..667220
Molecular Weight (calculated)
10312.9 Da
IEP (calculated)
8.820
GRAVY (calculated)
0.189
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MTCMRVDLKS VIYVTIHLKR SPSCLNKPSI LPQGQIETIL WGLETAYGKL HLYFSLSARK MEELETCLVM IIDSLLNMYI RSKAVYYHT
001: MKKTVKFSNF LLVQHVEELS EYTRFGLWWI FLGVASSIGL GSGLHTFVLY LGPHIALFTI KVMQCGRVDL KSAIYDTIQL KRSPSWLDKP CHEFGSPVFS
101: SGVPLSSILP QVQIEAILWG LGTALGELPP YFISRAASLS GGKMKELETC SGDDNGFIAK RVNQIKSWLL SHSQYLNFFT ILILASVPNP LFDLAGIMCG
201: QFEKPFWEFF LATLIGKAII KTHIQTVFII CVCNNQLLDW VENELIYILS FVPGFASALP ELTAKLRLMK EKYLIASPPV SSDINVKKWD LSFASVWNGV
301: VWLMLLNFFG QIVTSTAQRY LKKQQEEELD ALTNKSSLTS KKSK
101: SGVPLSSILP QVQIEAILWG LGTALGELPP YFISRAASLS GGKMKELETC SGDDNGFIAK RVNQIKSWLL SHSQYLNFFT ILILASVPNP LFDLAGIMCG
201: QFEKPFWEFF LATLIGKAII KTHIQTVFII CVCNNQLLDW VENELIYILS FVPGFASALP ELTAKLRLMK EKYLIASPPV SSDINVKKWD LSFASVWNGV
301: VWLMLLNFFG QIVTSTAQRY LKKQQEEELD ALTNKSSLTS KKSK
Arabidopsis Description
KMS2Vacuole membrane protein KMS2 [Source:UniProtKB/Swiss-Prot;Acc:F4I8Q7]
SUBAcon: [plasma membrane,golgi]
SUBAcon: [plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.