Factsheet for HORVU1Hr1G066500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G084420.1
HORVU5Hr1G057510.3
HORVU6Hr1G068770.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31040.1	HORVU2Hr1G084420.1	AT1G27300.1	21798944
AT2G31040.1	HORVU5Hr1G057510.3	AT2G46550.1	21798944
AT2G31040.1	HORVU6Hr1G068770.1	AT3G50910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G305300.1	Wheat	mitochondrion	50.86	24.59
TraesCS3D01G271200.1	Wheat	mitochondrion	50.29	24.31
TraesCS3A01G271600.2	Wheat	mitochondrion	49.71	24.03
Os01t0673800-01	Rice	mitochondrion	38.86	18.68
VIT_12s0028g02170.t01	Wine grape	plastid	33.71	17.46
KRH55746	Soybean	plastid	32.57	17.01
KXG33095	Sorghum	mitochondrion, plastid	35.43	16.85
Zm00001d011569_P001	Maize	plastid	34.86	16.71
GSMUA_Achr8P27290_001	Banana	plastid	31.43	15.85
Bra021688.1-P	Field mustard	plastid	30.29	15.68
CDX97768	Canola	plastid	30.29	15.68
AT2G31040.1	Thale cress	plastid	30.86	15.43
CDY58985	Canola	plastid	29.71	15.38
PGSC0003DMT400020320	Potato	plastid	29.14	15.04
Solyc07g055050.2.1	Tomato	plastid	27.43	14.2
PGSC0003DMT400052662	Potato	plastid	26.86	13.91
Solyc12g010870.1.1	Tomato	plastid	26.86	13.74
CDX84806	Canola	extracellular, plasma membrane, plastid	5.14	7.69

Protein Annotations

EnsemblPlants:HORVU1Hr1G066500.1	EnsemblPlantsGene:HORVU1Hr1G066500	PANTHER:PTHR34118	PANTHER:PTHR34118:SF3	SEG:seg	UniParc:UPI000B47317A
UniProt:A0A287G0Y4	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:472946083..472947141

Molecular Weight (calculated)

18478.9 Da

IEP (calculated)

9.008

GRAVY (calculated)

-0.367

Length

175 amino acids

Sequence
(BLAST)

001: MAAARPPSSR VSTGWGRRTA TPFATPTTSS RTRTSSLTCS TSSPTAAPTR PPPSPASLPE DEYSRFLSIN CAMDLDSVDV VLSKELMAPA KSILKTQLVA
101: TRRGRSTCTK AVNRPTFIRW KLALTRQEQE QCDQATRETT CGIVSCCSSG MKGGCPVPAA AGEGQAQEGE AAVPL

Best Arabidopsis Sequence Match ( AT2G31040.1 )
(BLAST)

001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD

Arabidopsis Description

CGL160Protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82279]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.