Factsheet for GSMUA_Achr8P27290_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P12060_001
GSMUA_Achr2P22980_001
GSMUA_Achr6P08980_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31040.1	GSMUA_AchrUn_...	AT2G46550.1	21798944
AT2G31040.1	GSMUA_Achr1P12060_001	AT3G50910.1	21798944
AT2G31040.1	GSMUA_Achr2P22980_001	AT3G50910.1	21798944
AT2G31040.1	GSMUA_Achr6P08980_001	AT3G50910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55746	Soybean	plastid	60.81	62.99
VIT_12s0028g02170.t01	Wine grape	plastid	60.81	62.43
Solyc12g010870.1.1	Tomato	plastid	59.65	60.53
PGSC0003DMT400020320	Potato	plastid	59.08	60.47
Os01t0673800-01	Rice	mitochondrion	62.54	59.62
Zm00001d011569_P001	Maize	plastid	61.67	58.63
CDY58985	Canola	plastid	57.06	58.58
Bra021688.1-P	Field mustard	plastid	56.77	58.28
CDX97768	Canola	plastid	56.48	57.99
PGSC0003DMT400052662	Potato	plastid	55.91	57.4
Solyc07g055050.2.1	Tomato	plastid	55.91	57.4
KXG33095	Sorghum	mitochondrion, plastid	60.52	57.07
AT2G31040.1	Thale cress	plastid	56.48	56.0
TraesCS3B01G305300.1	Wheat	mitochondrion	56.48	54.14
TraesCS3A01G271600.2	Wheat	mitochondrion	55.91	53.59
TraesCS3D01G271200.1	Wheat	mitochondrion	55.91	53.59
CDX84806	Canola	extracellular, plasma membrane, plastid	16.14	47.86
HORVU1Hr1G066500.1	Barley	plastid	15.85	31.43

Protein Annotations

EnsemblPlants:GSMUA_Achr8P27290_001	EnsemblPlants:GSMUA_Achr8T27290_001	EnsemblPlantsGene:GSMUA_Achr8G27290_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0008150	GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0033614	PANTHER:PTHR34118
PANTHER:PTHR34118:SF3	SEG:seg	UniParc:UPI00029634CF	UniProt:M0TU32	MapMan:1.1.9.3.1	:

Description

Putative ATP synthase protein I [Source:GMGC_GENE;Acc:GSMUA_Achr8G27290_001]

Coordinates

chr8:+:30506827..30510415

Molecular Weight (calculated)

37686.2 Da

IEP (calculated)

8.839

GRAVY (calculated)

-0.212

Length

347 amino acids

Sequence
(BLAST)

001: MAALNASACA AFRSVVRSAA DSPVDDPSPS LPARVVLPKK KPLKWSTGVA PGEYGGPPTT TKLRKYWGGG DEDPVTATDD FIWNKEFLGR MQQLLDEDQA
101: TPNPVPSLQK EPDSGFLSLN RALSLDSIEI DLSEELKPPP KPVLEQQVEA ARNGLSATEG TNDTASPRWR LVPTRREQAK WDRASKAATG GSDVILRESK
201: RAHGDPKVLA AQSQEQYIKL KRKLQILTVS IGGIGVVSAY FSYSPEIAAS FGAGLLGSLA YIRMLGNTID SMANGAKGFV KGAAGQPRLL VPVALVMMYN
301: RWNEILVPDY GFMHLELIPM LVGFFTYKVA TFVQAIQDAL DVVERRS

Best Arabidopsis Sequence Match ( AT2G31040.1 )
(BLAST)

001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD

Arabidopsis Description

CGL160Protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82279]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.