Factsheet for Bra021688.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004527.1-P
Bra012880.1-P
Bra030034.1-P
Bra032817.1-P
Bra036850.1-P
Bra039275.1-P
Bra039276.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31040.1	Bra030034.1-P	AT1G27300.1	21798944
AT2G31040.1	Bra032817.1-P	AT1G27300.1	21798944
AT2G31040.1	Bra004527.1-P	AT2G46550.1	21798944
AT2G31040.1	Bra039275.1-P	AT2G46550.1	21798944
AT2G31040.1	Bra039276.1-P	AT2G46550.1	21798944
AT2G31040.1	Bra012880.1-P	AT3G50910.1	21798944
AT2G31040.1	Bra036850.1-P	AT3G50910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58985	Canola	plastid	96.15	96.15
AT2G31040.1	Thale cress	plastid	85.8	82.86
VIT_12s0028g02170.t01	Wine grape	plastid	65.68	65.68
KRH55746	Soybean	plastid	62.43	62.99
PGSC0003DMT400020320	Potato	plastid	62.13	61.95
Solyc12g010870.1.1	Tomato	plastid	62.43	61.7
Solyc07g055050.2.1	Tomato	plastid	61.24	61.24
PGSC0003DMT400052662	Potato	plastid	60.65	60.65
GSMUA_Achr8P27290_001	Banana	plastid	58.28	56.77
Os01t0673800-01	Rice	mitochondrion	55.92	51.92
TraesCS3A01G271600.2	Wheat	mitochondrion	55.03	51.38
TraesCS3D01G271200.1	Wheat	mitochondrion	55.03	51.38
TraesCS3B01G305300.1	Wheat	mitochondrion	54.73	51.1
Zm00001d011569_P001	Maize	plastid	55.03	50.96
KXG33095	Sorghum	mitochondrion, plastid	54.73	50.27
HORVU1Hr1G066500.1	Barley	plastid	15.68	30.29

Protein Annotations

MapMan:1.1.9.3.1	EnsemblPlantsGene:Bra021688	EnsemblPlants:Bra021688.1	EnsemblPlants:Bra021688.1-P	ncoils:Coil	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0009534	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0033614	UniProt:M4DYU2	PANTHER:PTHR34118	PANTHER:PTHR34118:SF3	TMHMM:TMhelix	UniParc:UPI00025449A9
SEG:seg	:	:	:	:	:

Description

AT2G31040 (E=6e-147) | ATP synthase protein I -related

Coordinates

chrA04:-:13865647..13867717

Molecular Weight (calculated)

37398.2 Da

IEP (calculated)

9.864

GRAVY (calculated)

-0.326

Length

338 amino acids

Sequence
(BLAST)

001: MAIRTYISAT STTPPIPQDP SRSPLPTKII LPNKKPEKWS TGVAPGEYGG PPTTTKLRKY WGGEKEDPIT SKDLIWNRDF MDQMKKLFDS PDDAPLDPSP
101: SKEESSGFLS FSRVMSLDSM DVDLSKELAS SSSKSVLRDL EASKSEARKQ MSKARVSPKW KLAPTRREQD KWDRATKAAT GGSDVMLRDV RRPRGDPEVL
201: AAESREQYFK LKNKLQLLTV GIGGVGLVSA YISYTPEITL SFGAGLMGSL AYMRMLGNTV DAMADGARGV MKGASGQPRL LVPVVLVMIF NRWNAILVPE
301: YGFMHLELIP MLVGFFTYKI ATFFQAIEEA ITISTQKD

Best Arabidopsis Sequence Match ( AT2G31040.1 )
(BLAST)

001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD

Arabidopsis Description

CGL160Protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82279]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.