Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G305300.1 | Wheat | mitochondrion | 97.79 | 97.79 |
| TraesCS3D01G271200.1 | Wheat | mitochondrion | 97.51 | 97.51 |
| Os01t0673800-01 | Rice | mitochondrion | 75.97 | 75.55 |
| Zm00001d011569_P001 | Maize | plastid | 71.55 | 70.96 |
| KXG33095 | Sorghum | mitochondrion, plastid | 71.55 | 70.38 |
| VIT_12s0028g02170.t01 | Wine grape | plastid | 54.7 | 58.58 |
| KRH55746 | Soybean | plastid | 53.59 | 57.91 |
| GSMUA_Achr8P27290_001 | Banana | plastid | 53.59 | 55.91 |
| PGSC0003DMT400020320 | Potato | plastid | 51.93 | 55.46 |
| Bra021688.1-P | Field mustard | plastid | 51.38 | 55.03 |
| CDX97768 | Canola | plastid | 51.1 | 54.73 |
| Solyc12g010870.1.1 | Tomato | plastid | 51.66 | 54.68 |
| CDY58985 | Canola | plastid | 50.55 | 54.14 |
| AT2G31040.1 | Thale cress | plastid | 52.21 | 54.0 |
| Solyc07g055050.2.1 | Tomato | plastid | 49.45 | 52.96 |
| PGSC0003DMT400052662 | Potato | plastid | 49.17 | 52.66 |
| HORVU1Hr1G066500.1 | Barley | plastid | 24.03 | 49.71 |
| CDX84806 | Canola | extracellular, plasma membrane, plastid | 13.26 | 41.03 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G271600.2 | EnsemblPlantsGene:TraesCS3A01G271600 | PANTHER:PTHR34118 | PANTHER:PTHR34118:SF3 | SEG:seg | MapMan:1.1.9.3.1 |
Description
No Description!
Coordinates
chr3A:+:500974222..500977024
Molecular Weight (calculated)
39515.9 Da
IEP (calculated)
10.208
GRAVY (calculated)
-0.197
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLAVVTSR AAPVRPLRAS AASGEAAAAA ADQPGERRPV KIILPKKKPQ KWSTGMEPGS YGGGPTTIKP RKYWMGKEDR DPIGNTDDFI WNKNFLPHME
101: RVIANGGTDT PATIPRVTPA DEDSGFLSFN RAMDLDSVDV DLSKELMAPA KSILQTQLKA ARRGRSTSVE AVNRPTYIRW KLAPTRREQE QWDRATRATT
201: GGIDVILRES QQKVQLKGDP KVVAAEAREQ YLKLKERLQL LTLGIGGVGV VSAYVSYTPE IAASFSAGLI GSLVYLRMLG TSVDSLAGGT KAAAKGAAAQ
301: PRLLIPMVLV MMYNRWNAIL VPEYGFMHLE LIPMLVGFFT YKIAMFTQAI QESVPDAGNR EV
101: RVIANGGTDT PATIPRVTPA DEDSGFLSFN RAMDLDSVDV DLSKELMAPA KSILQTQLKA ARRGRSTSVE AVNRPTYIRW KLAPTRREQE QWDRATRATT
201: GGIDVILRES QQKVQLKGDP KVVAAEAREQ YLKLKERLQL LTLGIGGVGV VSAYVSYTPE IAASFSAGLI GSLVYLRMLG TSVDSLAGGT KAAAKGAAAQ
301: PRLLIPMVLV MMYNRWNAIL VPEYGFMHLE LIPMLVGFFT YKIAMFTQAI QESVPDAGNR EV
001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD
Arabidopsis Description
CGL160Protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82279]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.