Factsheet for Os01t0673800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0509600-01
Os02t0704600-01
Os08t0400300-01
Os09t0363500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G31040.1	Os02t0509600-01	AT1G27300.1	21798944
AT2G31040.1	Os08t0400300-01	AT2G46550.1	21798944
AT2G31040.1	Os09t0363500-01	AT2G46550.1	21798944
AT2G31040.1	Os02t0704600-01	AT3G50910.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011569_P001	Maize	plastid	84.34	84.11
KXG33095	Sorghum	mitochondrion, plastid	84.07	83.15
TraesCS3B01G305300.1	Wheat	mitochondrion	76.92	77.35
TraesCS3D01G271200.1	Wheat	mitochondrion	75.82	76.24
TraesCS3A01G271600.2	Wheat	mitochondrion	75.55	75.97
GSMUA_Achr8P27290_001	Banana	plastid	59.62	62.54
VIT_12s0028g02170.t01	Wine grape	plastid	57.14	61.54
KRH55746	Soybean	plastid	53.85	58.51
PGSC0003DMT400020320	Potato	plastid	53.57	57.52
Solyc12g010870.1.1	Tomato	plastid	53.85	57.31
Bra021688.1-P	Field mustard	plastid	51.92	55.92
CDY58985	Canola	plastid	51.65	55.62
CDX97768	Canola	plastid	51.37	55.33
PGSC0003DMT400052662	Potato	plastid	50.55	54.44
Solyc07g055050.2.1	Tomato	plastid	50.55	54.44
AT2G31040.1	Thale cress	plastid	51.37	53.43
CDX84806	Canola	extracellular, plasma membrane, plastid	13.19	41.03
HORVU1Hr1G066500.1	Barley	plastid	18.68	38.86

Protein Annotations

EMBL:AK072055	EnsemblPlants:Os01t0673800-01	EnsemblPlantsGene:Os01g0673800	EntrezGene:4325906	PANTHER:PTHR34118	PANTHER:PTHR34118:SF3
ProteinID:BAD73314.1	ProteinID:BAD73367.1	ProteinID:BAS73634.1	ProteinID:EAZ13057.1	RefSeq:XP_015619276.1	SEG:seg
UniParc:UPI000048DF20	UniProt:Q5QMQ3	MapMan:1.1.9.3.1	:	:	:

Description

guanine nucleotide exchange factor for Rop 6Similar to ATP synthase protein I -related. (Os01t0673800-01);Similar to ATP synthase protein I -related. (Os01t0673800-02);Similar to predicted protein. (Os01t0673800-03)

Coordinates

chr1:-:27677194..27681560

Molecular Weight (calculated)

39117.0 Da

IEP (calculated)

9.951

GRAVY (calculated)

-0.207

Length

364 amino acids

Sequence
(BLAST)

001: MSLPALAAGR AASVRPPRAS AASGEAAAAA AADQPAGRRP VKVILPKKKP QKWSTGMAPG EYGGGPATPK PRKYWMGKED RDPVGNTDDF IWNKDFLPHM
101: ERVIANGGAD TPPTITRLTP VDEDSESGFL SINRAMSLDS VDVDLSKELQ APTRPILKTQ VEAAWRGRAI GAEAVNGVAS PRWRLVPTRR EQAKWDRAAK
201: AATGGSDVIL RESKSRGQQG DPEVLAAKSR EQYLELKQRL QLFTLGIGGI GLVSAYFSYS PEIAASFGAG LIGSVLYLRM LGTSVDSLAG GTGETVKSAA
301: AQPRLLIPVA LVMMYNRWNE ILVPDYGFMH LELIPMLVGF FTYKIATFAQ AIQESIPAVG NRES

Best Arabidopsis Sequence Match ( AT2G31040.1 )
(BLAST)

001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD

Arabidopsis Description

CGL160Protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82279]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.