Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G271200.1 | Wheat | mitochondrion | 98.07 | 98.07 |
| TraesCS3A01G271600.2 | Wheat | mitochondrion | 97.79 | 97.79 |
| Os01t0673800-01 | Rice | mitochondrion | 77.35 | 76.92 |
| Zm00001d011569_P001 | Maize | plastid | 72.65 | 72.05 |
| KXG33095 | Sorghum | mitochondrion, plastid | 72.65 | 71.47 |
| VIT_12s0028g02170.t01 | Wine grape | plastid | 54.97 | 58.88 |
| KRH55746 | Soybean | plastid | 53.87 | 58.21 |
| GSMUA_Achr8P27290_001 | Banana | plastid | 54.14 | 56.48 |
| PGSC0003DMT400020320 | Potato | plastid | 51.93 | 55.46 |
| Bra021688.1-P | Field mustard | plastid | 51.1 | 54.73 |
| Solyc12g010870.1.1 | Tomato | plastid | 51.66 | 54.68 |
| CDY58985 | Canola | plastid | 50.83 | 54.44 |
| CDX97768 | Canola | plastid | 50.83 | 54.44 |
| AT2G31040.1 | Thale cress | plastid | 51.93 | 53.71 |
| Solyc07g055050.2.1 | Tomato | plastid | 48.9 | 52.37 |
| PGSC0003DMT400052662 | Potato | plastid | 48.62 | 52.07 |
| HORVU1Hr1G066500.1 | Barley | plastid | 24.59 | 50.86 |
| CDX84806 | Canola | extracellular, plasma membrane, plastid | 13.54 | 41.88 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G305300.1 | EnsemblPlantsGene:TraesCS3B01G305300 | PANTHER:PTHR34118 | PANTHER:PTHR34118:SF3 | SEG:seg | MapMan:1.1.9.3.1 |
Description
No Description!
Coordinates
chr3B:+:490595504..490598337
Molecular Weight (calculated)
39500.0 Da
IEP (calculated)
10.249
GRAVY (calculated)
-0.155
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLAVVTSR AAAVRPLRAS AASGEAAAAA ADQPAERRPV KIILPKKKPQ KWSTGMEPGS YGGGPTTIKP RKYWMGKEDR DPIGNTDDFI WNKNFLPHME
101: RVIANGGTDT PATIPRVTPA DEDSGFLSIN RAMDLDSVDV DLSKELMAPA KSILQTQLKA ARRGRSTSVE AVNRSTFIRW KLAPTRREQE QWDRATRATT
201: GGIDVILRES QQKVQLKGDP KVVAAEAREQ YLKLKERLQL LTLGIGGIGV VSAYVSYTPE IAASFSAGLI GSLVYLRMLG TSVDSLAGGT KAAAKGAAAQ
301: PRLLIPMVLV MMYNRWNAIL VPEYGFMHLE LIPMLVGFFT YKIAMFTQAI QESIPDVGNR EV
101: RVIANGGTDT PATIPRVTPA DEDSGFLSIN RAMDLDSVDV DLSKELMAPA KSILQTQLKA ARRGRSTSVE AVNRSTFIRW KLAPTRREQE QWDRATRATT
201: GGIDVILRES QQKVQLKGDP KVVAAEAREQ YLKLKERLQL LTLGIGGIGV VSAYVSYTPE IAASFSAGLI GSLVYLRMLG TSVDSLAGGT KAAAKGAAAQ
301: PRLLIPMVLV MMYNRWNAIL VPEYGFMHLE LIPMLVGFFT YKIAMFTQAI QESIPDVGNR EV
001: MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD
101: PSKEKSSGFL SFSRVMSLDS MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA TGGSDVMFRE LRRPRGDPEV
201: QAAKDREQYF KLKNKIQVLT LGIGGVGLVS AYISYTPEIA LSFGAGLLGS LAYMRMLGNS VDAMADGARG VAKGAANQPR LLVPVVLVMI FNRWNAILVP
301: EYGFMHLELI PMLVGFFTYK IATFFQAIEE AISITTQKPE SISPDTQASD
Arabidopsis Description
CGL160Protein CONSERVED ONLY IN THE GREEN LINEAGE 160, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O82279]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.